Detail



ID : Ahg479200

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479200|fgenesh2_kg.3__1901__AT3G17250.1
Sequence
GTAATTTATC CAAAATTAAA ATGCGTCCAA GCAAAGCTTC AGTGACTCAA ACATGGCTGC TTTACAGACA GCTTTGTCTT TGGAAAGATC TCTTAATCAG CTTTGTCCGT CAGTTCATAA GAAGAGCAAA ATCGATGCTT TTGAGTCATA ACATGGTCGC TGATTCTGCT GAGATCAGTG TTATCGATGT CAAGTCTCAT CTCTCCGTTG GGAAAGATCC TAGTAACTTT CAGATTGCTG AAATTCGAAT TCATGATTCA ATCTGTATTG AGATTCCGGG CTCTGAAGAA ACGCCTCTTT TAGGATCGGT CAAGAGTTGT TCTGCAGCTG CAACGATTGT TGAAGAGCCT GTTACTGAGT TTGTCCCAAA TATAAGCTCT GGGAGTTATG CGGATAAGGG TGACTACCGG GAGTACATGG AAGATGAACA CATATGCATA GACGACCTTT CAGATCATCT TGGGTCCTCC TTCTACAGAT TTCCGGTGCC TATCGCTTTC TACGGTGTGT TTGATGGCCA TGGTGGATCT GAGGCATCAC AGTATATAAA AGAGAATGCA ATGAGATTGT TCTTTGAAGA TGCTGTTTTT CGAGAATCGC CCTCCGTTGT GGACACTTTT TTCTTGAAAG AACTGGAGAA ATCTCACCGG GAAGCTTATA GGCTTGCTGA TCTCGCCATG GATGATGAAA GAATAGTTAG TAGTTCGTGC GGAACAACCG CATTGACCGC TCTTGTAATC GGAAGACATT TAATGGTCGC TAATGCTGGC GATTGTCGTG CAGTGCTCTG TAGGAAAGGA AAGGCTGTTG ATATGTCATT TGATCACAAA TCTACATTTG AGCCAGAACG GAGACGGGTA GAGGATTTAG GAGGGTACTT TGAAGGCGAG TATCTCTACG GTGACCTTGC TGTGACAAGA GCTCTTGGAG ACTGGTCAAT AAAGAGGTTT TCACCCCTTG GTGGATCTTT CTCACCTCTG ATCTCAGACC CGGACATTCA ACAGATGATT CTAACCGAGG AAGACGAATT CTTGATTATG GGATGTGACG GTGTTTGGGA TGTGATGACA AGTCAGTATG CTGTCACTTT CGTCAGGCAA GGACTCAGGA GACAAGGTGA CCCAAGAAGG TGCGCTCTGG AGCTCGGAAG GGAAGCGTTG AGGCTAGACT CATCAGATAA CGTTACAGTG GTGATCATCT GCTTCTCATC ATCACCAGCT CCTCAGAGAA GAAGAATACG GTTCTGTGTT TCCGATGAAG CCCGAGCCCG GTTACAGACA ATGCTAGAAG GCTAACTGAT GAAGGTTTTT GAGCTGTCTT GAGGAGGGGA CAATGTATAT ATTATTGCAA CAGAGATGGA TTTTGACTTT TGAGATAACC CTGCCAAGGC CAAATGATTT GATGACATTA TCACATCTCT CTGATATCGG ATGAAATAAA AGGAAGCTAT TTATTCTGTA GGATTATCGA AGCACTTATG TTACAAAAAC TGATTAAGAT CTAAGGAATT CAGGTGATTC AGTTAATCAA CTAATT 
Length1536
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6927845.. 6929916
Download Sequence
A.thaliana
AGI-codeAT3G17250.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg488052 mechanosensitive channel of small conductance-like 10
6.16441 Ahg943888 Sec14p-like phosphatidylinositol transfer family protein
26.6833 Ahg934405 conserved peptide upstream open reading frame 52
28.4605 Ahg483683 SMAD/FHA domain-containing protein
29.5635 Ahg921262
31.749 Ahg936770 RS2-interacting KH protein
34.9857 Ahg936938 Plant invertase/pectin methylesterase inhibitor superfamily
35.242 Ahg486888 saposin B domain-containing protein
42.1426 Ahg328082 LIM domain-containing protein
46.3681 Ahg481406 DNAJ heat shock N-terminal domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression