Detail



ID : Ahg479220

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479220|fgenesh2_kg.3__1921__AT3G17440.1
Sequence
CGTCGGTATC TATTTTTTCT CCGGCGATAT GGCTTCAAAT CTTCCTATGA GCCCTCAATT AGAGCAGATC CATGGCGAAA TCCGTGACCA TTTCCGAGCC CTCGCGAATG GTTTCCAGAG GTTGGATAAG ATCAAGGATT CAACTAGACA AAGCAAACAA CTTGAAGAAC TTACTGAGAA GATGAGAGAA TGTAAAAGGT TGGTCAAGGA GTTCGACCGT GAACTCAAGG ATGAGGAAGC TAGAAATTCT CCTGAAGTAA ATAAGCAATT GAACGATGAG AAACAATCTA TGATCAAGGA GCTCAATTCT TACGTTGCAC TAAGAAAAAC GTATATGAGT ACCCTTGGCA ACAAGAAAGT TGAGCTTTTC GATATGGGAG CTGGAGTTAG TGGCGAACCT ACAGCTGAGG AAAATGTTCA AGTGGCTTCA TCTATGTCAA ACCAGGAGCT TGTTGATGCT GGAATGAAAA GAATGGATGA GACTGATCAG GCCATTGAGC GCTCAAAACA GGTTGTAGAA CAAACACTCG AAGTTGGAAC TCAAACTGCA GCTAATTTAA AGGGACAGAC GGATCAAATG GGACGCGTTG TTAACCACTT GGACACTATT CAATTCTCAA TCAAGAAAGC CTCCCAGCTG GTGAAAGAGA TAGGGAGACA GGTGGCTACC GATAAATGCA TAATGGGGTT CCTGTTTCTC ATTGTATGTG GTGTAGTAGC CATTATCATA GTGAAGATCG TGAATCCGAA TAACAAAGAC ATTAGGGACA TCCCAGGATT AGCTCCTCCA GCGCAATCGA GGAAACTGTT GTACTTGAGG AATCAAGACT ACATGTGAGA TTATAAATCT CTATTTGTAT ATTTATTCAC GAGGAATGAG GAAATTGCAT CTTGAGGTTC GATATTTCCT TTTAATTTGT TAACACTCCA TTTCATGGAT GAGAGAGAGG GTTTGGGGCT TGTTGGCATT GTGTGCTTTG ATAGTTGCAG AGTCTTGGAG ATGTTTATGT TCTTTTGCTT TTTAACCCAA TTGTTTGAAT CTGGGTTTTG ATTGGAGGGT GTGTAAATTT TCGGCTTTTG TCTATTTCTT TTTCTTTTTG TTTTGTAGCA ACTCATCACT TCTTTTGTAT AAAATTCAGA CCATGTTATA CTCTCTCTCA CGTTCTCATT 
Length1170
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7023864.. 7026664
Download Sequence
A.thaliana
AGI-codeAT3G17440.1
Descriptionnovel plant snare 13
TAIR curator summarymember of NPSN Gene Family
Alias[ATNPSN13][NPSN13][novel plant snare 13]
Gene coexpression
MR
MR Locus Description
3 Ahg471648 basic pentacysteine 2
4.89898 Ahg328660 cyclic nucleotide gated channel 9
7.48331 Ahg472327 ARID/BRIGHT DNA-binding domain-containing protein
8.3666 Ahg471065 F-box and associated interaction domains-containing protein
10.6771 Ahg355638
11.4018 Ahg943174 Protein of unknown function DUF106, transmembrane
12.49 Ahg478311 Protein phosphatase 2A regulatory B subunit family protein
19.8997 Ahg946828 DHHC-type zinc finger family protein
20.5426 Ahg492815 small nuclear ribonucleoprotein associated protein B
20.7846 Ahg926218 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression