Detail



ID : Ahg479325

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479325|fgenesh2_kg.3__2026__AT3G18270.1
Sequence
ATGTTTTCGA TCGTATCTTC TTCTTCTTCA CTCGTCAATT CAACTCTAAA TATCCAAAAT TCGCCGAAAT CTCCGATCTC CGTTATGTCG GCGACGTCTA AATTCAAAAC CCTAACGGAG AATTTCACCG TGAGAGTGCT TAAAGCAGAG AATCGCGAAC TGAACGTGCC TCTGCTCTCA CCTTTCACTA TCGCTTCTTC ACGGCTTGAT TCAGTCAATA ACGTTGCGAT TCGGATTGAG CTTAGCGATG GGTGTGTCGG TTGGGGAGAA GCTCCGATTT TGCCGTCGGT AACGGCGGAG GATCAGATAA CGGCCATGGT AAAAGCGCGG GAAACTTGTG AGTTTCTGAG AGAGTTACCG GAGATGAAAC TTGGTAATGC TCTTAAGGAG ATCGAAAGAT TTCTCCCTGG TCATCAATTT GCTTCTATAA GAGCTGGGAT GGAGATGGCT ATGATTGATG CAGCAGCAAA GAGTGTAGGA ATGCCATTGT GGAAACTATT TGGTGGAGCT TCAAGTATTA TTACTACCGA CATTACAATT CCTATAGTTT CTCCGGAGGA AGCGTCTACT TTGGCTTCAA AGTATAGAAA ACGAGGTTTT GAAACCTTGA AGCTCAAGGT CGGGAAGAAT CTTAAGGCTG ACGTAGAAGT TCTCCAGGCT ATACGTGCAG TCCACCCTAC TTGTTCCTTT ATTTTGGATG CAAATGAGGG TTATCAAACA GAGGAAGCTG TTAGAGTTCT TGAGACGCTG CATGAAATGA AGGTTACACC GGTCCTCTTT GAACAACCCG TCCACAGAGA CAATTGGGAA GGTCTCAGTC ACGTGACTCG AACTGCAAAA AACAGATTCG GAGTCTCTGT TGCAGCAGAT GAGAGTTGCA GAGGCTTGAC TGATCTCAAG AAAATCATAG AAGGTGGTAT CGTAGATGTT GTTAACATCA AACTCGCGAA AACCGGAATC CTCGAGGCCC TTGAGGTAAT TGAATTGGCT AAGTCATCTG GAATTGAGCT AATGATGGGG GGAATGGTGG AGACTAGATT AGCAATGGGG TTCTCCGGTC ACGTTGCTGC TGGCCTTGGA TGTTTCAGAT TCATCGACTT GGACACTCCG CTTCTTCTGT CTGATGATCC AGTTCAAGGT GGCTACAAAG CTTGGGGCGC TGTCTACGAG TTTAACGATG AAGGCGGTCA CGGAGGATAT CTTCAGTGGA ATGATGTTGC GTAGTGAAAT TCCTTCAGTC TACTTAGGTC CCTTTTCTTT TGAAGTTTAA TGTTGATTTT GGGTTTTGGA AAGGCTAATC TTGGTCCTAA ATTCTCAGTA TGTGTTAGTT GAGAGTGTAT GTAATATACA AGCTTTGTAA TTTCAGCCCC AGGGAGTAGC AAATAAATGT AGGAAATTCA TTACACTGAT CTTGATTGAT ATCTGTCTGA AACACACACA CAACACAGGT CTAATTCACA GAGCTTGTTA TAGATCACAA TTAAGTGCTT CTTGTTTCGA TC 
Length1502
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7362120.. 7363792
Download Sequence
A.thaliana
AGI-codeAT3G18270.1
Descriptioncytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene
TAIR curator summarya cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.
Alias[CYP77A5P]["cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene"]
Gene coexpression
MR
MR Locus Description
18.3303 Ahg944727 Regulator of Vps4 activity in the MVB pathway protein
24.6577 Ahg478897
33.541 Ahg479013 DNA photolyase family protein
36.9459 Ahg476728
37.55 Ahg350042 glucuronidase 2
37.9737 Ahg481458 F-box/RNI-like/FBD-like domains-containing protein
46.7654 Ahg901488 ubiquitin-protein ligases
51.2055 Ahg494326 Pentatricopeptide repeat (PPR) superfamily protein
54.4977 Ahg903337 Protein of unknown function, transmembrane-40
64.4981 Ahg940670 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression