Detail



ID : Ahg479577

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479577|fgenesh2_kg.3__2278__AT3G20520.1
Sequence
GAAAGCTCTC CACTACCATG GCGTGCCCTA GATTGATTTT TCTGATTCTG ATCAAGTTCT TCATTTTACA GACTGCTTTA TCAAGTTCTT GGCAAACATT GAGTGGGAAA CCTCCGGCTG TGATTGCTCG AGGCGGATTC TCTGGTATGT TTCCAGATTC CAGTAGTCAA GCATATCAGT TGGTGAATAT AACAACTTCA CCAGACGTAA TGCTCTGGTG TGATCTTCAA CTAACAAAGG ATGGTGTTGG AATCTGCTTT CCAAATCTGA ATCTTGATAA CGGTTCTGAT GTAATGACCA TTTACCCAAA TTACAAAGAA AGGTTTTCTG TTGATTTCAC ATGGAAGGAA CTATCTGATG TGAAATTGGC CCGGGGTGTT CTCTCGAGAC CAAATATATT TGATGATCTT TCCTCGATAT TGGCTATTGA AGAAGTAGCA AAGTTGACAG CCTCAGGCCT CTGGTTAAAC ATTCAGGACA GTGCTTTCTA CGCGCAACAC AATTTGAGTA TGAGAAACTC TGTTCTCTCT CTATCAAGAC TCCTGAAAGT TAACTTCATA TCTTCACCAG AGATCAGTTT CCTGAAGAGC ATGAAAAACA GTGTCAAGCC GACTGTGACA AAACTCATCT TTAGGTTTCT GAAACAAGAC CACATAGAAC CCTTCACCAA CCAATCTTAC GGCTCTCTTG CCAAGAATCT AAGTTATATA AGAACGTTTT CTTCTGGAAT TCTTGTTCCA AAATCTTACA TATGGCCCAT AGATTCAGCT CTTTACCTAC AACCCCACAC GTCGCTTGTA ACAGATGCTC ATAAAGAAGG TTTACAAGTT TTCGCCTCGG AGTTTGCCAA TGATTTTGTA ATTGCTTATA ACTACAGCTA TGATCCAACG GCTGAGTATT TATCTTTCAT TGACAACGGA AACTTCTCCG TTGATGGTTT CATATCAGAC TCCCCGGTGA CTCCATATCG AGCCATCAAT TGCTTCTCTC ATGTGGACAC CAAAAGAGCT AAGGAGCAAG CTAAGATAAC TATTCTCTCG AAGAATGGAG CGAGTGGAGA TTTCCCGGGC TGTACTGACT TGGCGTATGA GAGAGCTGCA AGCGACGGGG CAGACATTCT TGATTGCAAT GTCCAGATGT CTAAAGACAA GATTCCTTTT TGTATGAGCT CCATTGATCT TATAAACAGC ACTAATGTTA TTGAAACAAG CTTCAGAAAT CTGTCATCAG TAGTTTCAGA GATTCAACCG AGAAGTGGGA TCTACAGTTT CAGCCTGACC ATGTCTCAGA TACAAACCTT GAAGCGTAAG AGCACTATTT CGAATCCTGA AAGGGACTGG GGTTTATTCA GAAACCCAAG AAACAACAAG GCTGGGAAGT TTCTTACATT ATCCGAGTTC TTGTTTCTTC CAAACCATTA CAGCTCTCTC TTAGGCATCT TGATAGAAGT GGAGAATGCA GCTTATTTAG TGGAACATCA AGGAATTAGC GTGGTCGATG CGGTACTAGA TGAATTGAAG AGAGCTAATA ATAATCAGCA AAACAAGACA AGTGCAAGAA CAATACTGAT CCAGTCTACT GATAAGTCTG TCTTGATGAA GTTCAAGGAG AAGAACAAAA TGAATCATGA TGAGCTAGTC TATAGAGTCG ATAAAGACAT CCGTGATGTA GAAGATTCTG CAGTCAGGGA CATCAAGAAT TTCGCAGGCT CGATTGTCAT CAGGAAGAAC TCAGTCTTTC CTTACAAAGG GTTTTTCATC TTTAAGAAGG GGCCAAATGT TGTTTCAAAG CTAAAATCAA GCGGGCTTCG TGTTTACGTA GAAACATTTA GCAATGAGTT TGTAACTCAA GAATATGATT TTTACGAGGA TCCAACGTTG GAGATAGACT GTTTTGTCCG GGATATCCAA GTTGATGGCA TTATCACTGA CTTCCCAGCA ACCACTGCAA GATACAGAAA GAACCAGTGT TACGGCAAAT TTGATCTGCC TGAAACCGGT GAGCTCAGAA CTTTGGGGAA TCCAATGATT TTGGCTCCAG CCGAAGCTCC ATATCCATTA CTACGTATCT CAGATGTCTC GGAACCTCCA TTGCCTGAAG TAAGAAGTCA GACTCCTGCT TCTTCACCAT CAAAGGCAGA GGAAAAAGCA ATAGAAGTTC CCTTTGCATT TATAGCCATG GCCATTCTTG TGAGCTTCTT TATTTCAGTT TAGTGTTAAG TGCTTGTAAC CTACTTCAAC TGCACTATCT TATGAATAAC AGTGTCTAGT ACTATATCAT TCTTCTTTTT AATGTTTCAA TAAGATATCT AGAATT 
Length2316
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8498101.. 8501181
Download Sequence
A.thaliana
AGI-codeAT3G20520.1
DescriptionSHV3-like 3
TAIR curator summary
Alias[GDPDL5][SVL3][Glycerophosphodiester phosphodiesterase (GDPD) like 5][SHV3-like 3]
Gene coexpression
MR
MR Locus Description
1 Ahg497279 SHV3-like 3
8.83176 Ahg932662
15.8745 Ahg926144
17.7482 Ahg946414
20.9762 Ahg315087 Cystatin/monellin superfamily protein
28.6182 Ahg934428
47.5605 Ahg490348 Ribosomal protein L19e family protein
48.9592 Ahg354951
50.4083 Ahg929882 MUTS-homologue 5
51.303 Ahg887810 Transmembrane proteins 14C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression