| Annotation |
|---|
| Description | jgi|Araly1|479865|fgenesh2_kg.3__2566__AT3G23560.1 |
| Sequence |
CGTACATCTC TTATTTAATT CCTCACCTTG CCAAATCACA ATTCCCCTCT TCAAGTCTTA ACCAAACCCA AAGTCCTTCC AACAAGAAGA TCCAATGGCT GATCCGGCGA CGAGTTCTCC GTTGTTGGTT AACCATGAAG GTGGAGAAGA TGAAAGAGGA AGGAGAGGAT CATCAACTTT GGTTCAAAAG CTAATCGACG TGGAAGAAGC TAAAGCTCAA ATGATTTACT CTTTGCCAAT GATACTCACC AATGTTTTCT ACTACTGTAT CCCTATAACT TCTGTGATGT TTGCTTCTCA CCTCGGTCAA CTCGAGCTCG CCGCTGCCAC TCTTGCCAAT TCTTGGGCCA CCGTCTCCGG TTTTGCCTTC ATGGTAGGGT TAAGTGGATC ACTTGAGACA TTATGTGGAC AAGGCTTTGG TGCAAAAAAC TATAGGATGT TGGGGGTTCA TCTACAATCA TCTTGCATAG TCTCATTAGT CTTCAGCATC CTCATCACCA TCTTCTGGTT CTTCACAGAA TCGATTTTCG GACTTCTCAG ACAAGATCCT AGCATTTCAA AACAAGCTGC ACTCTATATG AAGTACCAAG CTCCCGGTTT ACTCGCTTAC GGGTTCTTAC AGAATATCTT GAGATTTTGC CAAACACAAT CGATCATTAC TCCACTAGTA TTCTTCTCGT TTGTTCCCTT GGTGATAAAT ATCGGTACCG CATATGTTCT TGTTTATTTA TCTGGCCTCG GATTCATTGG TGCTCCAATA GCTACATCTA TTTCATTGTG GATAGCTTTC CTTTCTCTCG GGACTTATGT GATCTGTTCA GAAAAGTTTA AAGAAACATG GACTGGATTT TCGTTGGAAT CATTCCGTTA TATCGTAATA AACTTGACAT TAAGCATCCC TTCTGCTGCT ATGGTATGTT TGGAATATTG GGCATTCGAG ATTCTTGTGT TCTTGGCAGG AGTGATGCCA AACCCGGAAA TCAATACTTC TTTGGTTGCT ATATGCGTCA ACACGGAGGC GATTAGCTAC ATGTTAACAT ACGGACTTAG CGCAGCTGCA AGTACGCGTG TGTCGAACGA ACTTGGAGCT GGAAATGTAA CAGGCGCAAA GAAGGCGACC TCAGTGTCCG TAAAGTTGTC TTTAGTTCTT GCTCTCGGCG TTGTAATTGT TTTACTTGTA GGTCATGATG GTTGGGTTGG GTTATTTAGT GATAGTCATG TGATTAAAGA GGAGTTTGCA TCATTGAGGT TTTTTCTTGC TGCATCTATA ACTCTTGATT CAATCCAAGG AGTTTTATCA GGAGTTGCTA GAGGATGCGG ATGGCAGCGT TTAGTCACGG TTATAAATTT GGCAACATTC TACTTAATAG GAATGCCGAT CGCAGCCTTT TGTGGTTTCA AGTTGAAGTT TTATGCCAAG GGTTTATGGA TTGGTCTCAT TTGTGGGATA TTTTGCCAAT CTTCATCTCT TTTGCTTATG ACAATCTTCC GGAAGTGGAC AAAGCTTAAT GCTGCTACGG TCTGAAAACT CTAGTTACGT TCCATTTTTC TACGGAGGCA CATTTATTTT CTTAAGCAAA TATGGAATCA GTTACTATGA TCAAGATATA TATTTGGAAC TCATGATCA |
| Length | 1629 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 10145052.. 10147474 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G23560.1 |
| Description | MATE efflux family protein |
| TAIR curator summary | Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds. |
| Alias | [ALF5][ABERRANT LATERAL ROOT FORMATION 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg889207 | HAD superfamily, subfamily IIIB acid phosphatase |
| 6.9282 |
Ahg923670 | peptidase M20/M25/M40 family protein |
| 9.48683 |
Ahg491894 | L-tyrosine decarboxylase |
| 14.1421 |
Ahg488487 | O-acyltransferase (WSD1-like) family protein |
| 16.9706 |
Ahg490335 | Protein of unknown function, DUF538 |
| 17.4929 |
Ahg922904 | IAA-leucine resistant (ILR)-like gene 6 |
| 17.7482 |
Ahg923674 | IAA-leucine resistant (ILR)-like gene 5 |
| 18.7083 |
Ahg929107 | Amino acid permease family protein |
| 20.445 |
Ahg338258 | terpene synthase 04 |
| 20.8327 |
Ahg483894 | galactinol synthase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|