Detail



ID : Ahg480455

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480455|fgenesh2_kg.3__3156__AT2G20140.1
Sequence
CTCCGAGAGC AAGAAACCTC TGAGAGAGAG AGAGACGAAG CAAAAATGGG TCAAGGACCA TCCGGCGGAT TGAATCGGCA AGGAGATCGG AAACCAGATG GTGGTGACAA GAAAGAGAAG AAGTTCGAAC CAGCCGCACC ACCTGCTCGT GTAGGGAGGA AGCAACGGAA GCAAAAAGGA CCTGAAGCGG CGGCGAGATT GCCGACGGTG ACTCCTTCTA CTAAATGTAA GCTTCGATTG CTTAAACTGG AGCGAATCAA GGACTATTTG CTTATGGAGG AAGAGTTTGT GGCGAATCAG GAGAGATTGA AACCTCAGGA AGAGAAAGCT GAGGAAGATA GATCTAAAGT TGATGATCTT CGTGGTACAC CTATGAGTGT TGGCAATCTT GAAGAGCTTA TTGATGAGAA TCACGCCATT GTTTCTTCTT CTGTTGGTCC TGAGTATTAC GTTGGGATTT TGTCTTTCGT TGATAAGGAT CAGCTTGAAC CTGGTTGCTC CATTTTGATG CATAACAAGG TACTCTCTGT TGTTGGGATT CTTCAAGATG AAGTGGATCC AATGGTGTCT GTGATGAAAG TGGAGAAAGC TCCTTTGGAA TCATATGCTG ACATTGGAGG TTTAGAAGCT CAGATTCAGG AGATCAAGGA AGCTGTTGAG CTACCTTTAA CACATCCCGA GTTGTATGAA GATATCGGTA TTAAGCCACC AAAAGGTGTG ATCTTGTATG GTGAGCCAGG CACTGGGAAG ACATTGCTTG CTAAGGCAGT GGCGAATTCT ACATCAGCTA CTTTCTTGCG TGTTGTCGGT AGTGAACTGA TTCAGAAGTA TTTGGGAGAT GGTCCCAAGC TTGTGAGGGA GCTTTTCAGG GTTGCCGATG ACCTTTCACC ATCTATTGTT TTCATAGACG AGATTGATGC TGTTGGCACC AAGCGGTATG ACGCAAACTC AGGTGGTGAA CGTGAAATCC AAAGAACCAT GTTGGAACTA CTGAACCAGC TTGATGGATT TGATTCAAGA GGAGATGTTA AGGTAATTCT CGCGACAAAC AGAATCGAAA GTCTTGACCC GGCACTTCTT AGACCAGGCC GGATCGACAG GAAAATCGAG TTCCCTCTTC CAGATATCAA AACAAGGAGA CGTATCTTCC AGATACACAC ATCAAAGATG ACTTTGGCCG AAGATGTGAA CTTAGAAGAG TTTGTAATGA CGAAAGACGA GTTCTCAGGA GCTGATATAA AGGCGATATG TACAGAAGCT GGTCTGCTTG CTCTTAGAGA GCGTCGAATG AAAGTGACGC ATGTGGACTT CAAGAAGGCG AAGGAGAAGG TTATGTTCAA GAAGAAAGAA GGAGTCCCTG AAGGTCTTTA CATGTGAAAG AAGCACAAAC GACTATTTCA ATCTCTTTTT CGAGTTTGCT CTCTTTTTCT CTTTTTCTGA TCATATAAAA TCGTTTGCCC TTTATTAATC TGCTTCGAAA TTAGCAATTT ATTAGTTTGC ATTCTTCAGA ACCACCTCAT AGATATATTC ATTTGAAATT TCCATTATTT TTACTATATA GTCCAATTTG CAA 
Length1573
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19470036.. 19472405
Download Sequence
A.thaliana
AGI-codeAT2G20140.1
DescriptionAAA-type ATPase family protein
TAIR curator summary
Alias[RPT2b][regulatory particle AAA-ATPase 2b]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg474567 Endomembrane protein 70 protein family
10.0995 Ahg471101 Pentatricopeptide repeat (PPR-like) superfamily protein
11.8322 Ahg473214 60S ribosomal protein L18A-1
12.7279 Ahg477122 Pentatricopeptide repeat (PPR) superfamily protein
12.8452 Ahg496360 DCD (Development and Cell Death) domain protein
12.9615 Ahg350146
13.7113 Ahg478789 heat shock protein 60-3A
16.5227 Ahg482274 MOS4-associated complex 3B
17.7482 Ahg943614 Peptidase family M48 family protein
21.5407 Ahg475254 Clathrin adaptor complexes medium subunit family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression