Detail



ID : Ahg480540

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480540|fgenesh2_kg.3__3241__AT2G19260.1
Sequence
AGAGAGAGAA AGAGCGATAG AGCGAGAGAG AGCGACGGAG AGAGAGAAAC TTGCGTCAGT GGAGGAGAGT CGGAAACTTG AGAAACTTGT GTAGAAGAAA CGCCATAACT CGGAGGAAGC CCAAACGAGG ATTTAGCTAT TGTGTCTCTT CGTAGTCATC TGGAGATCAG GAGGATATGA ACTCTACCAT TCCAGGGAGA CTACATGAAG AAGTTGACCA ACAGATTCAT CGGTACTTAG AGAATTAATG TGCTTTCCGA TACTTTTGGG TTTATCAGGA AAAGATGTTG GTGGAAAGTT CGTTCAGCTC TTCCGTTGAA TCTAGTCTAC TGAACGTGTC CGAGTATCAA GATCCATTTG CTACATATGA TTGGGCTTCG CTTGCTGAAA CTTATCAGAT GATCCACAAA GTTCCCGAAC AGTCTCAAGT AAGCTTTTGT AAAGCTGTTC CAGTCACTGA TGCAATGAAT CTTGATGAAT CAAAACATCC AAAACATCAA GTAAGTTGTC CAGAGAAATC TGTTATGCAC AAGGTATCGG GAAAGGCCCT GACTTCTCTT GTGTATCGTC GAAGGAAGAG GAGCTTAAAG CTTGGGGGAA CTGAGGAACA TAACCTAGGA AAAACCAGGA AACAGGATGA TTCACTTGAT GACTCTATTG TCTCTTTACA TAACACTGGA GAAAGTACAA AAAGGAAAAA TCGCTTCAAC AACTGTCTTG TCTATAGCCG GAAAAAAAGG AGAGGGGAAT CCAGTTGTAC TTTTACAGGA GAAACTACGA TAAGGGGTGC TGGGCTTGAT GATGCTTTTG TTTCTAAGCA TGACTGTGGA GAAACCAGGA GAAGAGGCAA TCGATCAGAT AATTGTCTTG TGTATAGCAG AAAAAAAGGT AGAGTGAAAT TTAATAGTTG TACTTTTAGC AAACATGTCA CTGGAGGAAC CAAGATAGGC TGTGATCAAG CTGACTCTTC TGCATGTAGC CACAGGGGAC AGGTAGTTAA AGCTGATAGT GCTTTTACTG GACCTAACCC TGGAGAAATC AAGAAAAGTG GTCATCATCC TGTTTACAAC CAAAGCAAGC AGTTAGTGAA ATCTAATGGG AGTTTTACTG AAAGTCATGT TGGGAAAACC AAGAGAAATG GAGAAAAATC TGATGTCTTG CTGACATATA GCCGGAGGAA GCAGAGAGGC AAATCTGTTG GTGTTCGGGT TAATGGCTTT CTAGTTTATA CCCGGAAGAA GTTAAAATTC AGAGGACCTT TTGCTAGACA TGACCTAAGA GAAACCAAAA CAAATGGTGA TCAACTTGTA GATGATACCC AGGTTACCGA AGTGACATAT TCTTCAGATG GAACTAATGA CAGCTGCTCG TCATTGAAAT CCAGTTCTGA AGTTGATTCA AGTTCGAGTA CAACTGGGGA AGATGATTGC TATTCCTCTG ATGCTGTGGT GTCTGAGACA GATACAGACG GTAGTAGCGG CCCTTTCAGG CTGTGTAAAC ATTGTGATAA GCCAGGAACT GTCGAAAAGA TGCTAATTTG TGATGAATGT GAAGAAGCAT ATCATACAAT CTGCTGCGGT GTACAAATGA AAGACATCGC AGGGATAGAT GACTGGCTCT GTCCATCCTG TTTGAAAAAT AAGCCATCAA AGACCAAGAC GAAGGGGAGA ATTTCACGGG AACGGAAATG GAGAGTTACA GTACCATTGG TAATAGGAGT TCGAATAGGA AAAAAGTTTC AAGCAGATGT TCCAGACTGG TCAGGTCCAA CAATGAGTGA TACTTCTTTT GTGGGTGAAC CCTTGGAAAT TGATCAGTCA GAATACACGC ATGATCTCAA GAAGGCCAAG AATAGTAAGA AACAATGTTC TGCAGTGAAT TGGCTTCAGT GCAGAGAGGA AGATAGTAAT GGAGATATCT GCGGAAAGTG GCGTAGGGCC CCTCGTTCAG AGGTACAAAC CAAAGACTGG GAATGCTTCT GCTGCGTCTT TTGGGATCCA TCACGTGCTG ACTGTGCCGT CCCTCAGGAA CTGGAGACAA GTGAGATCCT TAAACAACTC AAGTACATCA AGATGCTAAG ACCTCGATCA GACGCCAAAA AGCGAAAGCT AGGAGCAAAG GGTCGAAGCA GATCACATAA CAAAGGAAAA TCTTGATGGA CACAATCAAA TGCATATGCT TTTGGATTAG AGACCTTAGA AACTAGAAAG GTAAACTCAG AAATTTTTTG TGAAGCGCCA ATGAGTTTTG TACCCCTTGC GAAACTTGAG GATATCAAGT TGCTCTATAA GTGATTAATT AGGTTCAGAT CTTTTGTTAG CTCCCAAAAC AGGAGTAGTG AA 
Length2342
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19983169.. 19987066
Download Sequence
A.thaliana
AGI-codeAT2G19260.1
DescriptionRING/FYVE/PHD zinc finger superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.3589 Ahg485917 Pentatricopeptide repeat (PPR) superfamily protein
4.47214 Ahg492240 Calmodulin-binding protein
5.56776 Ahg474438 Protein kinase superfamily protein
9.48683 Ahg486704 AP2/B3-like transcriptional factor family protein
10.198 Ahg947599 glutathione S-transferase THETA 1
11.1803 Ahg950648 DNA-directed RNA polymerase II
13.0767 Ahg934407 RNA-binding (RRM/RBD/RNP motifs) family protein
13.4907 Ahg938852 DNAse I-like superfamily protein
17.4929 Ahg471128 endoplasmic reticulum-type calcium-transporting ATPase 3
17.8326 Ahg470595 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression