Detail



ID : Ahg480584

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480584|fgenesh2_kg.3__3285__AT2G17010.1
Sequence
ATGGATTTCA GAAATTCCTT CAAATCTCAT AGCTCATACA AACAAATTCG AAGCCCTGGT GATCAAAGCG AGCCAAGCCC TGAACATCTT CCTATCCTCC ACGATCACGA TCACCATCCT GATCATTCCA GCATGGTCAT CGATGACCCG AAACCCGAAA GCACTCGTTC TAGCCTCGAT GATGGTCGTA ACGCACCTGT AGAACGTGAT GCCAGTTACA AATTTTGGCA AGAAAACACT GGAACACCCA CCGATGACAC GGCGGTGAGA ACAAGTGATA AAGATCCAAT CGCTACTATT CGAAAAGGCG ATAGATTAAG CGGTAGTTTC GATTTCGCGC AAGGGAAGCT ACCGGTTGAG GATTCTCCAA CGAAAATGGT TGCCGGAGAA CCTATGAATC GACAATGGAG AGGTAGAAAT AATGAAGAGA TCACACTTGA TGTTGATCAA GAAAATGATG ATGTAAGTCA CCAGACAATG CCTACGCCTA CATCAACGGC TCGAACCTCG TTTGATGCGT CTAGAGAATT GAGAGTCTCT TTTAACGTTC GTAGAGCGGG TGGTACGTTT GTTGCTGGTT CGGTTCCTTC TTCGTCTTCT CATTCGACTA CTTCTTCGTC CGCTACAATG CGGACGAATC AGGAGCAGCC GCAACAGCAG GAGGATGAGG TTGTTAGATG TACTTCGAAC ATGTCGTTTC AGAGGAAATC AGAGCTTATT TCGAGAGTTA AGACAAGGTC TAGGCTTCAA GATCCGCCAC GAGAGGAGGA AACGCCTTAC TCGGGTTGGA GATCGGGTCA GTTGAAATCC GGGTTACTTG GTGATATTGA TGAAGAGGAT GATCCATTAG CGGAAGAAGA TGTACCAGAT GAGTATAAAA GAGGGAAGCT TGACGCCATT ACATTGCTCC AGTGGCTTAG CTTAATCGCT ATTATAGCTG CATTGGCGTG TAGTTTATCG ATTCAGTCTT GGAAGAAAGT TAGAGTTTGG AACCTTCACT TATGGAAATG GGAAGTGTTT TTGCTGGTTC TTATATGTGG GAGGTTGGTT TCGGGTTGGG GAATCCGAAT TGTTGTCTTC TTCATCGAGA GAAACTTCCT TTTGCGAAAA CGTGTTCTTT ACTTCGTATA CGGTGTGCGT AGAGCTGTTC AGAATTGCCT CTGGCTCGGC CTAGTTCTTC TCGCTTGGCA TTTCTTGTTC GATAAGAAAG TACAAAGAGA GACAAGGAGC AGGATGAATC ATAAGAACAT CTCAGCTTGG AACATGAAAA GGCTAATGAA GATTGTGAGA AATGTTTCCC TCACCACATT GGACGAACAG ATGCTGGAAA GCACATACGA AGATGAATCC ACCCGCCAGA TACGAAGCGA AAAAGAAGCA AAAGCAGCGG CAAGGAAGAT TTTCAAGAAC GTTGAGCAAC GTGGCGCAAA GTACATTTAC CTAGAGGATT TGATGAGATT TTTGCGGGAA GACGAGGCGA TGAAGACCAT GGGCCTCTTC GAAGGTGCAC CGGAGACCAA AAGGATTAGC AAATCAGCCT TAAAGAACTG GCTGGTCAAT GCTTTCAGAG AGCGACGAGC TCTTGCCCTG ACACTCAACG ACACCAAGAC AGCGGTGAAC AAGCTCCATC ACATGATTAA TATTGTCACT GCCATTGTCA TTGTTGTCAT ATGGCTTGTC CTTCTTGAAA TTGCTTCCTC CAAGGTACTT CTATTTGTAA GTTCACAAGT TGTACTCTTG GCCTTCATCT TTGGGAACAC TGTCAAGACC GTCTTTGAGT CCATCATCTT CTTATTCATT GTACACCCTT ACGATGTTGG TGATCGCTGT GAGATTGACA GTGTACAGTT GGTGGTGGAG GAGATGAACA TACTCACTAC GGTGTTCTTG AGATACGACA ATCTAAAGAT TATGTATCCG AATAGTCTTT TGTGGCAAAA ATCAATCAAC AATTACTACC GCAGTCCGGA CATGGGAGAT GCAATCGAGT TCTGTGTCCA CATTACTACT CCTCTTGAAA AGATCGCCGT GATCAAACAG AGAATATCAA ACTACATCGA CAACAAGCCA GAGTATTGGT ACCCACAAGC CAAAATCATT GTAAAAGATT TGGAAGATTT GCACATAGTA AGACTAGCAA TATGGCCATG TCACAGGATT AATCACCAAG ATATGGCTGA AAGATGGACA AGAAGAGCCG TCTTAGTCGA AGAAGTGATT AAGATCCTCC TTGAACTCGA CATTCAACAC CGGTTTTATC CACTCGATAT CAATGTACGA ACAATGCCTA CCGTTGTCTC TAGCAGAGTC CCACCTGGCT GGTCACAAAA CCAACCTGCC TGAAATTTTG ATGAACAACC CAACAGAGGT TGATGTTTAT TTCTTTTTGC CTCAAACGAG TCAACAATTT TGTAACC 
Length2417
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20561240.. 20564369
Download Sequence
A.thaliana
AGI-codeAT2G17010.1
DescriptionMechanosensitive ion channel family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg493877 YELLOW STRIPE like 4
30.348 Ahg494099 Methylenetetrahydrofolate reductase family protein
32.0312 Ahg315187
34.1174 Ahg358841 target of early activation tagged (EAT) 3
38.0132 Ahg348023
46.7333 Ahg887666
50.1597 Ahg949086
61.7738 Ahg475314 NAD(P)-linked oxidoreductase superfamily protein
69.7495 Ahg323872 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
70.484 Ahg476838 O-methyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression