Detail


ID : Ahg480767

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480767|fgenesh2_kg.3__3468__AT2G18640.1
Sequence
TATTGTTGAT CAAAATGGAA GCTCAAAATA TCTTTCTCTA TCTTTTAATC GTCTTTCTAT CTCTACATTT TGTGTTTGCA ACTCTGAAAG GACGGCTGAG TCCGGCTAAT ACACGGCGGC TTATCCGCCT TCTCCATCTC CCGATCAAAT CACCAGCCGC CGCTGCTATT TTCGCCAGAA AAGACATCCG TGAGTTTCTT GATTCATCAA TCAAATTAGT AAACGAAGAA GATGATTTCG GCTTCAACTT CGATTTCAAA CCATACATGA TCAACAAAGC AGAGACAATA AACAGAGCAT TAGACGAAGC CATTCCACTC ATTGAGCCTC TCAACATCCA CAAGGCAATG CGTTACGCGA TTCTCGCCGG AGGCAAACGT GTCAGGCCAA TACTCTGCCT CGCTGCGTGT GAGCTAGTCG GCGGGGAAGA GCGTTTGGCG ATTCAAGCGG CTTGTGCGGT TGAAATGATC CACACAATGT CACTCATCAA AGACGATCTT CCTTGTATGG ATAACGACGA TCTCCGGCGA GGCAAACCAA CAACACACAA AGTATTCGGA GAAAGTGTAG CTATTCTCTC CGGCGGCGCA CTTTTAGCTC TAGCTTTCGA GCATTTGACG GAAGCTGACG TGTCTTCCAA GAAAATGGTT CGAGTCGTTA AAGAATTGGC TAAGTCTATT GGAACGAAAG GACTTGTGGC GGGACAAGCG ATGGATTTAA GCAGTGAAGG GCTGGATCCA AACGACGTCG GATTGGAGGA TCTTGAATAT ATTCACGTTC ATAAAACCGG TGCGTTGCTC GAAGCATCAG CGGTTATCGG AGCGGTTATT GGCGGTGGAT CAGAGGAAGA GATAGAGAAG GTGAGATACT TTGCGAGGTG TATTGGCTTG TTGTTTCAGG TTGTTGATGA TATCTTGGAT GAGACCAAGT CCTCGGAGGA ATTGGGAAAA ACCGCCGGAA AAGATCAGGT CGCCGGAAAG CTGACGTATC CGAAAGTGAT GGGTCTTGAG AAATCTAAGG AGTTCGTGAA GAAGTTGAAG AGAGAAGCTA AAGAACACAT TCAAGGGTTT GATTCTGACA AAGTGAAACC TTTGATAGCT CTTACTAACT TCATTGCCAA CAGAAACAAC TGAA
Length1134
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21604412.. 21605545
Download Sequence
A.thaliana
AGI-codeAT2G18640.1
Descriptiongeranylgeranyl pyrophosphate synthase 4
TAIR curator summaryEncodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase
Alias[GGPS4][geranylgeranyl pyrophosphate synthase 4]
Gene coexpression
MR
MR Locus Description
17.4642 Ahg931485 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
21.7945 Ahg904826 transposable element gene
29.1548 Ahg357124 Cytochrome b561/ferric reductase transmembrane with DOMON related domain
36.8782 Ahg942204
44.7437 Ahg948975
48.4665 Ahg478254 eukaryotic initiation factor 4A-III
58.7367 Ahg891101
69 Ahg903943 Duplicated homeodomain-like superfamily protein
73.5663 Ahg891309
75.2994 Ahg493037
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression