Detail



ID : Ahg481444

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481444|fgenesh2_kg.4__504__AT2G25900.1
Sequence
AACTTTACCG TAGTTAATAT TGACCCAACC ATGGTTAAAA TAAAGCAGTT TATAACACAG AAACACACTT CTCTCATCTC TAGACTCACT CACAACAAAA ATGATGATCG GAGAAAATAA TAACCGGCCA CATCCGACGA TCCATATCCC TCAATGGGAT CAAATCAACG ATCCAACGGT CACAATCTCT TCACCATTCA CTTCCGTCAA CACAAACGGC GTTAACGACT ACCCACACTC TCCGTCACCG TACCTCGAAT CCTTCGCTTC TCTCTTCCGT TACCTCCCGT CAAACGAGTT AACAAACGAT TCCGACTCAT CAAGCGGAGA CGAGTCATCA TCACTCACCG ACTCGTTCTC CTCCGACGAG TTTCGCATGT ACGAGTTCAA AATCCGGCGA TGCGCTCGAG ACCGATCTCA TGATTGGACG GAGTGTCCGT TTGCACATCC CGGAGAAAAA GCTCGCCGAC GTGATCCAAG GAAGTTTCAT TACTCCGGCA CCGCTTGTCC TGAGTTTCGA AAAGGAAGTT GTAGAAGAGG TGATTCGTGT GAGTTCGCTC ATGGAGTTTT CGAGTGTTGG CTTCATCCTT CTCGTTATCG TACTCAGCCG TGTAAAGACG GAACGAGTTG CCGGAGAAGG ATCTGTTTCT TCGCTCATAC GACGGAGCAG TTACGAGTTT TACCTTGTTC GTTAGATCCA GATCTTGGAT TCTTCTCATC GACTTCTCCG ACTTCGATTC TTGTTTCTCC TTCGTTTTCT CCACCGTCGG AATCTCCGCC GCTTTCTCCG AGTACCGGTG AACTTATTGC GTCGATGAGG AAAATGCAAT TGAACGGAGG TGGTTCCTGG AGTTCTTCTC CGGTGAGATC TGGAGTTAGG TTACCTTTTT CGTCGTCTTT GCGTCCGATT CAGGCGCAGA CGTGGCCGAG AATAAGAGAG TTTGAGATCG AAGAAGCTCC GGCGATGGAG TTTGTGGAAT CTGGGAAAGA GCTGAGAGCG GAGATGTATG CAAGACTCAG TAGAGAGAAC TCACTCGGTT GAGTCGACTC GGCGACTCGG TCGAGTCTTT GATGACGTGG CGACTCGATC TGATTTTTGT AGATAAATGA CGTGGCGACT CGATCTTCGG ATGATGAAGA AAACAGCTAG GAGGAGAATT GAGAGCTATT CTTCTGGCTT TTTTCTCTGC AATTTTTTTT TTATTTTTGT TATCGGCTTT ACTTTGTTTG TTGTTTATTA ATGTTATATC ATTTTGTAAT TAGTTCTCAA ATGTATTTGG ATAA 
Length1284
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4978112.. 4979477
Download Sequence
A.thaliana
AGI-codeAT2G25900.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summaryputative Cys3His zinc finger protein (ATCTH) mRNA, complete
Alias[ATCTH][ATTZF1][A. THALIANA TANDEM ZINC FINGER PROTEIN 1]
Gene coexpression
MR
MR Locus Description
10.2956 Ahg488795 Eukaryotic aspartyl protease family protein
17.6635 Ahg906729 trehalose phosphatase/synthase 11
26.5518 Ahg478057 Protein of unknown function (DUF506)
27.4226 Ahg496217 Protein of unknown function, DUF584
34.9428 Ahg937466 glutamine-dependent asparagine synthase 1
38.7685 Ahg496670 beta-D-xylosidase 4
39.37 Ahg914474 Aluminium induced protein with YGL and LRDR motifs
41.7133 Ahg940804 Auxin-responsive GH3 family protein
44.4072 Ahg944713 Protein of unknown function (DUF506)
47.833 Ahg480901 Protein of unknown function (DUF506)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression