Detail



ID : Ahg481465

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481465|fgenesh2_kg.4__525__AT2G26080.1
Sequence
CTCTCTCAGA TTTGCATTTT TTTCTTCTTT GTTATGGAGC GTGCAAGGAG ACTTGCTTAC AGAGGGATCG TGAAACGTCT CGTCAACGAG ACAAAACGCC ACCGTAACGG CCAATCCTCT TCTCTCCCGG CGACGACGGT TACTCCCTCA AGGTATGTCT CCTCCGTCTC CTCCTTTCTC CATCACCGTC GTGATGTCTC TGGATCGACT TTCACCACCT CCGGTAGAAA TCAACAAACA CGATCAATCT CCGTCGATGC GTTAAAGCCA AGCGACACTT TCCCGCGCCG TCACAACTCT GCTACACCGG AGGAACAAAC ACAGATGGCG AATTACTGCG GATTCGATCA TCTCAACACG TTGATTGATT CAACTGTTCC GAAATCGATT CGGTTAGATT CGATGAAGTT CTCTGGGAAA TTTGATGAAG GATTAACAGA GAGTCAGATG ATTGAGCATA TGAGTGATTT AGCTTCGAAG AACAAAGTTT TCAAATCATT CATTGGTATG GGATACTATA ACACTCATGT TCCTCCTGTG ATTTTGCGTA ATATTATGGA GAATCCTGCT TGGTATACTC AATATACTCC TTATCAAGCT GAGATTTCTC AAGGAAGGCT TGAATCTTTG CTCAATTACC AGACGGTTAT TACTGATCTT ACCGGTTTAC CGATGTCGAA CGCTTCGTTG CTCGATGAAG GTACGGCGGC TGCGGAAGCG ATGGCTATGT GTAATAATAT CTTAAAGGGG AAGAAGAAGA CGTTTGTTAT TGCTAGTAAT TGTCATCCTC AGACGATTGA TGTTTGCAAG ACTAGAGCGG ATGGTTTCGA TTTGAAAGTT GTGACGGTTG ATCTTAAGGA TGTGGATTAT AGCTCGGGGG ATGTGTGTGG AGTGTTGGTT CAGTATCCGG GGACTGAAGG TGAAGTGTTG GATTATGGTG AGTTTGTTAA GAATGCTCAT GCTAATGGTG TTAAGGTTGT GATGGCTACG GATTTGTTGG CTTTGACAAT GTTGAAACCG CCGGGGGAGT TTGGGGCTGA TATTGTCGTT GGGTCGGGTC AGAGGTTTGG TGTTCCCATG GGTTATGGTG GTCCTCATGC TGCTTTCTTG GCTACTTCAC AAGAGTATAA GAGAATGATG CCTGGGAGAA TTATTGGTGT TAGTGTTGAT TCTTCCGGGA AGCAAGCTTT GCGTATGGCT ATGCAGACTA GGGAACAGCA TATCCGTAGG GATAAAGCTA CCAGCAACAT CTGTACCGCT CAGGCATTGC TTGCAAACAT GACTGCCATG TATGCTGTCT ATCATGGACC AGAAGGCTTA AAATCTATTG CACAACGGGT TCATGGTCTA GCTGGTGTAT TTACTTTAGG ATTGAAGAAA CTGGGAACTG CACAAGTCCA AGATCTTCCC TTCTTTGACA CTGTCAAAGT TACGGTTTCG GATGCACATG CAATTGTTGA TGCGGCTGCC AAAAAAGAGA TCAATTTGCG TCTTGTGGAC TCCAACACTA TTACTGTTGC GTTTGATGAA ACAACCACCT TGGATGATGT CGACAAACTT TTTGAAGTTT TTGCTTCCGG CAGGCCGGTT CAATTCACGG CTGAGTCTCT CGCACCGGAG TTTAACAATG CTATTCCTTC TAGCTTAACA AGACAGAGCC CTTATCTGAC CCACCCAATC TTCAACATGT ACCACACGGA GCATGAGTTA CTTAGGTACA TCCACAAGTT ACAAAATAAA GATCTATCAT TGTGCCACAG CATGATTCCA CTAGGATCAT GTACAATGAA ATTGAATGCC ACGACCGAAA TGATGCCAGT CACATGGCCA AGTTTCACCA ACATGCACCC TTTTGCTCCT GTAGAACAAG CCCAAGGTTA TCAGGAAATG TTTACAAACT TGGGTGAGCT CTTGTGTACT ATCACTGGGT TCGACTCTTT CTCATTGCAA CCTAATGCCG GTGCTGCTGG CGAGTATGCC GGGCTCATGG TTATTCGTGC ATATCATATG TCAAGAGGAG ATCATCACCG AAATGTATGC ATCATACCTG TTTCTGCACA CGGGACAAAC CCTGCTAGTG CTGCTATGTG CGGAATGAAA ATTGTTGCCG TTGGAACTGA TGCCAAGGGA AACATTAACA TCGAAGAGTT GAGGAAAGCC GCCGAAGCCA ACAAGGACAA CTTGGCTGCT CTTATGGTTA CATACCCGTC AACCCATGGA GTTTATGAAG AGGGTATCGA TGAGATTTGC AACATAATTC ATGAAAATGG AGGCCAAGTT TATATGGACG GTGCTAATAT GAATGCACAG GTGGGGTTGA CAAGCCCTGG TTTTATTGGA GCGGATGTTT GCCATCTCAA TCTCCACAAA ACCTTCTGTA TCCCTCACGG AGGTGGAGGT CCCGGTATGG GCCCTATCGG TGTGAAGCAA CATTTGGCTC CATTCCTACC TTCTCACCCT GTGATACCTA CCGGTGGTAT CCCTGAACCC GAGCAGACAT CACCGTTGGG AACCATTTCT GCAGCACCAT GGGGGTCTGC GCTAATCTTG CCCATCTCTT ATACATACAT TGCCATGATG GGATCTGGGG GACTCACAGA CGCCTCAAAG ATCGCAATTT TGAATGCTAA CTACATGGCA AAGCGTCTGG AGAGCCACTA CCCAGTTCTA TTCCGTGGTG TCAATGGAAC AGTCGCTCAC GAATTCATCA TTGACTTGAG AGGATTCAAG AACACTGCTG GAATTGAACC AGAGGATGTG GCCAAACGGC TGATGGATTA TGGGTTCCAT GGACCGACAA TGTCTTGGCC TGTCCCTGGA ACACTTATGA TCGAGCCAAC CGAAAGCGAA AGCAAGGCTG AGTTAGATAG GTTCTGTGAT GCTCTCATCT CGATCAGGGA CGAAATTTCC CAGATTGAGA AAGGAAACGC AGATCCTAAC AACAACGTTC TCAAGGGAGC TCCACATCCT CCTTCATTGC TGATGGCAGA CACATGGAAA AAGCCGTATT CCCGTGAATA CGCAGCCTTC CCCGCTCCAT GGCTCCGCTC CTCCAAGTTC TGGCCCACTA CAGGGCGCGT GGACAACGTG TATGGAGACC GTAATCTGGT GTGTACTCTC CAACCGGCGA ACGAAGAACA GGCTGCAGCC GCAGTGTCTG CTTAAATTAA GCCACTATAA AGCGATTTGC ACTCGCACCA GAAGCCACAA TGAAGCGATT CGGACTTTAC TTCTCTTCCC AGTCTCATCA TCACTTTCAC TTTCATTTCC TGTACAATGT ACATACGTAG TCCTAAGTTC TCCCTCATTT ATCTAATAAT TTACATTTCT ATATATTCCA CTTTCTTTTA CTTTTAACAT TCGATTCGGA TGATGTGATC ACCATCGTGG TTATATTTAT GACATATGGT CTCTTTGGAA AAAGTTTGAA TTCTTAGGAT ATTTGTTGTT TCA 
Length3453
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5320846.. 5325636
Download Sequence
A.thaliana
AGI-codeAT2G26080.1
Descriptionglycine decarboxylase P-protein 2
TAIR curator summary
Alias[AtGLDP2][GLDP2][glycine decarboxylase P-protein 2]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg496704 general control non-repressible 5
3.31662 Ahg472589 glutamate:glyoxylate aminotransferase
7.93725 Ahg471868 high chlorophyll fluorescence phenotype 173
9 Ahg943760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
10.0499 Ahg487877 kinesin like protein for actin based chloroplast movement 1
10.0995 Ahg480385
10.583 Ahg490667 fructose-bisphosphate aldolase 2
11.5758 Ahg472174 Major facilitator superfamily protein
12.0416 Ahg491144 catalase 2
12.49 Ahg941228 PHYTOENE SYNTHASE
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression