Detail



ID : Ahg481671

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481671|fgenesh2_kg.4__731__AT2G28350.1
Sequence
ATGGAGCAAG AGAAAAGCTT GGATCCACAA CTATGGCATG CTTGTGCTGG ATCAATGGTT CAAATCCCTT CTGTGAATTC AACGGTTTTT TACTTCGCCC AAGGTCACAC AGAGCATGCT CACGCGCCTC CTGATTTCCA CGCGCCGCGC GTTCCACCGC TTATCCTCTG TCGTGTCGTC TCTGTGAAGT TCCTCGCCGA CGCTGAAACA GACGAAGTTT TCGCTAAAAT TACGCTTTTG CCACTACCGG GAAACGACTT GGATCTAGAG AACGACGCCG TTTTGGGTCT GACTCCTCCG TCTTCTGACG TTAACGTTAA CGGTAACGGT AACGAGAAAC CGGCGTCTTT TGCTAAAACG TTAACGCAGT CTGACGCTAA TAACGGCGGT GGTTTCTCTG TTCCACGTTA TTGCGCTGAG ACGATTTTCC CGCGGCTTGA TTACACGGCG GAGCCACCGG TTCAAACCGT GATTGCTAAA GATATTCACG GCGAGACTTG GAAATTCCGG CATATTTACA GAGGAACGCC TCGCCGTCAT CTCTTAACCA CCGGTTGGAG CACTTTCGTT AACCAAAAGA AACTAATCGC CGGGGATTCA ATCGTTTTCC TCCGTTCTGA ATCCGGTGAC CTCTGCGTTG GAATCCGTCG TGCTAAACGC GGTGGTCTCG GATCTACCGG GCTAGGATCC GACAATCCTT ACCCTGGATT CTCCGGTTTC CTCCGTGACG ATGAAACATC AACAACATCG AAGCTTATGA TGATGAAACG CAACGGAAAC GACGGAAACG CGGCGGCTGG AGGGAGGGTT AGAGTGGAAG CAGTGGCGGA AGCGGTGGCG CGTGCAGCGT GTGGACAAGC GTTTGAGGTT GTTTATTATC CACGCGCTAG TACACCGGAG TTTTGCGTTA AAGCAGCTGA TGTGAGATCA GCAATGAGGA TAAGATGGTG TAGTGGTATG CGTTTTAAAA TGGCGTTTGA AACAGAGGAT TCTTCAAGAA TCAGTTGGTT TATGGGTACT GTCTCCGCCG TTCAAGTCGC TGATCCTATT CGTTGGCCTA ATTCACCATG GCGTCTCCTT CAGGTAGCGT GGGACGAACC GGATTTGTTG CAAAATGTTA AGCGGGTAAG TCCGTGGTTA GTCGAATTGG TATCGAACAT GCCTGCAATC CATTTATCTC CTTTCTCTCC GAGGAAGAAG ATTCGAATAC CGCAGCCTTT TGAATTTCCT TTCGACGGTA CCAAATTCCC GATTTTCTCC CCGGGATTCG CCAACAATGG CGGTGGCGAA TCCATGTGTT ATCTGTCAAA CGACAACAAT AATGCTCCTG CAGGGATACA GGGAGCCAGG CAAGCTCAAC AACTCTTCGG ATCACCATCT CCGTCTTTGT TGTCTGATCT CAATCTTAGT AGTTACTCCG GTAACAAGTT ACAATCTCCG GCGATGTTTC TGTCCGGTTT TAACCCGAGG CATCATTATG ATAACATTGT GTCTCGTCAG ACTAGGGATA CTGAGAATAG TAATAACATT TCGTGCTCTT TAACGATGGG GAATCCTGCT ATGGTTCAGG ACAAGAAGAA GTCTGGTGGT TCGGTTAAGA CTCATCAGTT CTTGTTGTTC GGCCAACCTA TTTTAACCGA ACAACAAGTT ATGAACCGAA AACGGTCTTT GGAAGAAGAG GCGGAAGCGC AGGAGGAGAA AGGTTTAGCG GCTCGTGGAT TAACATGGAA TTACGGTTTT CAGGGACTTG AAACGGGTCA TTGCAAAGTT TTCATGGAAT CTGAGGATGT TGGACGCACA CTCGATCTCT CGGTTATTGG CTCGTACCAA GAATTGTACC GGAAATTGGC TGAGATGTTT CATATAGAAG AGAGGTCGGA TTTGTTGACT CATGTTGTGT ACCGGGACGC AAATGGTGCT ATCAAACGCA TTGGAGACGA ACCTTTCAGT GATTTCATGA AATCAACAAA GCGGCTAACA ATCAAGATGG ATATTGGTGG CGACAACGTG AGGAAGACGT GGATAACCGG AATCAGGACT GGTGAAAATG GTATAGACGC TACAAAGACC GGTCCGCTCA GCATCTTCGC TTGAAAGTGG CCTTTGTTTT GAACCTAATT TTATTTCCTG TCTTTTTTTC CTATTTTAAA TCCGTTTTGT TGGTCTTTTG TGTGTAACAG ACTATTTCCA AGTTTTATTG GTATTTGGAT TTATTTGTTT 
Length2220
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11278975.. 11281476
Download Sequence
A.thaliana
AGI-codeAT2G28350.1
Descriptionauxin response factor 10
TAIR curator summaryInvolved in root cap cell differentiation.
Alias[ARF10][auxin response factor 10]
Gene coexpression
MR
MR Locus Description
22.2261 Ahg333551 dicer-like 1
22.9129 Ahg480954 glycine-rich protein 2B
25.6125 Ahg489963 Protein of unknown function (DUF793)
29.1548 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
33.4365 Ahg946493 DWNN domain, a CCHC-type zinc finger
36.7696 Ahg491701 AFG1-like ATPase family protein
38.1051 Ahg490342 sucrose synthase 3
39.6106 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
44.8888 Ahg474726 NIMA-related serine/threonine kinase 1
46.0217 Ahg317046 Expressed protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression