| Annotation |
|---|
| Description | jgi|Araly1|482040|fgenesh2_kg.4__1100__AT2G31110.2 |
| Sequence |
TTTTCTTAGT GACCCCAAAA ACAAAATGGG ACTCTGTTTC CAACTCAACT TAGCCTCTCT GTCTCTCATA CTCTTCTCTT CATTTCCTGA ACTATTAGCA CAATCTCAAC AACATTTTTT GGGACAAAAC AACACAAGCT TGTTGAGTGG AGGAAGATGC AATTTGGCTA GAGGAAAATG GGTCTATGAT TCTACATATC CTCTCTATAG TGCTTTTAAT TGTCCCTTCA TCGACTCCGA ATTCAACTGC CAGAAAGCGG GTCGACCCGA CACTAACTAT CAACACTTCC GATGGCAACC TTTCTCCTGT CCTCTCCCCA GATTCGATGG GGTGAATTTT ATGAGGAGAA TGAGAGGGAA GAAGATAATG ATGGTAGGTG ACTCACTGAG TCTTAACATG TTCGAATCGT TGGCCTGCTT GCTTCATGCT TCTCTCCCTA ATGCTAAGTA CTCTCTTCGT CGAAGCCAAC CTCTCACTTC CCTCACTTTC CAGGATTATG GAGTGACGAT ACATTTGTAT AGAACACAGT TTCTAGTAGA CGTGGTTCAA GAAAAGGCAG GAAGAGTGCT TATGCTTGAC TCCATCAAAC AAGCCGATGC TTGGCTTGGC ATGGACGTTC TAATCTTCAA CTCGTGGCAC TGGTGGACTC ACACCTCCGG ACTCCAGCCG TGGGATTATA TGAGGGAAGG AAACCAATTG TACAAAGACA TGAACAGGCT TGTGGCTTAT TACAAAGGAC TTAACACATG GGCTCGTTGG ATTAACAATA ACATTGTCCC TTCACGCACT CAAGTCTTCT TTCAAGGTGT TTCTCCTGTC CACTATGATG GAAGAGAGTG GAACGAACCA TTGAAGTCGT GCAATGGTCA AACTCAGCCG TTCATGGGAC AAAGATATCC CGGAGGATTG CCCTTAGGTT GGGTTGTGGT TAACAAAGTG TTGAGCCGAA TCAAGAAACC GGTCCGTCTT CTCGATCTCA CTACTCTCTC GGAGTATCGC AAAGACGCAC ATCCAAGTCT CTATAATGGT CTCTCAAAGG GTCTAGACTG CAGCCATTGG TGTCTCCCTG GACTCCCTGA TACTTGGAAC TCACTTCTCT ACGCATCACT CACTTCCTAG TTCTCGTTTT ACACATATAA TTCTTTTCTA CTATTTTATA AATAGTTCGT GAGATTCCTG TGTGATTGTG ATTGATATTC GTCCGTTGTT AATTTAATCT TAAAATGTAA TTAACATTAT TACTAGTTTA CATGCAACAT CAGCTTAAAT TCTCCATAAA TTTTTTAT |
| Length | 1288 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 13975348.. 13979181 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G31110.2 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL40][TRICHOME BIREFRINGENCE-LIKE 40] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg900074 | Protein of Unknown Function (DUF239) |
| 3.31662 |
Ahg924762 | RING/U-box superfamily protein |
| 4.58258 |
Ahg488679 | |
| 5 |
Ahg927863 | cytochrome P450, family 87, subfamily A, polypeptide 9 |
| 5.47723 |
Ahg887308 | |
| 5.65685 |
Ahg919779 | branched-chain amino acid transaminase 2 |
| 6 |
Ahg941373 | Plant protein of unknown function (DUF946) |
| 6 |
Ahg934176 | |
| 6.32456 |
Ahg924719 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 6.32456 |
Ahg941035 | Ankyrin repeat family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|