Detail



ID : Ahg482070

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482070|fgenesh2_kg.4__1130__AT2G31380.1
Sequence
CCTTCTTATC TTCTTCTCTT CTCCAATCAC TCACAGAAAC AAAACTGCTT TTGTCTCTCA AGTCCTTTGT CTTTTAAAAA GGTTTTGTTC TTGAACAAGA GAAGAAAACA AGAGGCTGAT TTTCCTGTTT TGTAGATTCC TCTGATATTC AGATTCCCAC TTCTCAGGAA ATTTTTTTGA GAAATATGAA GATACAATGT GATGTGTGTG AGAAAGCTCC GGCCACGCTT ATATGTTGTG CCGATGAAGC TGCTCTGTGC GCTAAATGTG ATGTTGAGGT TCATGCTGCT AATAAGTTAG CTAGTAAACA CCAACGCCTT TTTCTTGACT CTCTCTCAAC TAAATTCCCT CCCTGCGACA TCTGCCTTGA GAAGGCAGCT TTCATATTCT GTGTAGAGGA TAGGGCTCTG CTCTGCAGAG ACTGCGACGA GGCGACCCAT GCACCAAATA CTCGCTCTGC TAATCACCAG CGTTTCTTAG CCACTGGAAT CCGAGTTGCT CTTAGTTCCA CTATTTGCAG TCAAGAAGTG GAGAAGAATC ACTTTGACCC ATCTAATCAG CAGAGTCTCT CTAAACCGCC AACTCAGCAA CCCGCTGCTC CATCTCCTTT GTGGGCTACC GATGAATTCT TCCGCTACTC TGATCTTGAG TGCAGTAATA AGCAGAAAGA GCAACTCGAC CTCGGGGAGC TGGATTGGCT TGCAGAGATG GGTCTGTTTG GTGACCAGCC TGATCAAGAG GCTCTACCGG CAGCCGAAGT TCCCGAGCTT TCCTTTTCAC ATTTGGCTCA TGTTCATTCC TACAATAGAC CTATGAAGTC CAATGTACCC AACAAGAAGC AGAGACTTGA GTACCGGTAT GATGATGATG AAGAGCACTT CCTAGTCCCC GACCTAGGCT AAACTATAGA TGAACTAAAT AGCACTTAGT TCGCATATGT CTCTACACGG GCTCATATAT TGTTTTCGCC TTGCTTTCTC CATGATCTGG TTTGTGTATC ACTGTATACA GGCTAAAACT TGGAAAACCT TATCATTTTA TTAGCAAGTG ATGCCTTGAA TTGC 
Length1064
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14121516.. 14123062
Download Sequence
A.thaliana
AGI-codeAT2G31380.1
Descriptionsalt tolerance homologue
TAIR curator summarya B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction.
Alias[BBX25][STH][B-box domain protein 25][salt tolerance homologue]
Gene coexpression
MR
MR Locus Description
1 Ahg928955
1.73205 Ahg341087
2.82843 Ahg935667 circadian clock associated 1
2.82843 Ahg495528 B-box type zinc finger family protein
3.74166 Ahg350602 high affinity nitrate transporter 2.7
3.74166 Ahg485852
4.12311 Ahg477426
4.47214 Ahg495863 CONSTANS-like 5
4.89898 Ahg470177 Homeodomain-like superfamily protein
4.89898 Ahg488447 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression