Detail



ID : Ahg482537

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482537|fgenesh2_kg.4__1597__AT2G35700.1
Sequence
ATGGAACGTG ACGACTGCCG GAGGTTTCAG GATTCGCCGG CGCAGACGAC GGAGAGAAGA GTGAAAAATA ATCCAAAGAA GAAAAGAGGC AAAGATGATG ATGAAAAGGT TGTTTCAAAG CATCCAACTT TCCGAGGTGT AAGAATGAGA CAATGGGGAA AATGGGTGTC CGAAATCAGA GAGCCAAAGA AGAAATCAAG AATCTGGCTC GGTACTTTCT CCACGGCGGA GATGGCGGCG CGTGCTCACG ACGTGGCGGC TTTAGCCATC AAAGGCGGTT CTGCACACCT CAACTTCCCG GAGCTCGCTT ACCACCTCCC TAGACCAGCT AGTGCCGACC CTAAAGACAT CCAAGCTGCC GCCGCCGCAG CTGCTGCCGC AATGGATGTA GAGACGTCTT CGCCGTCGCC GTCTCCCACT GTTACGGAAA CGTCATCTCC GGCTATGACA GCACTATCCG AAGACGCGTT CTCCGATCTT CCTGATCTCT TGCTCAACGT GAACCATAAC ATCGACGGCT TCTGGGACTC TTTTCCCTAC GAAGAACCCT TCCTCTCTCA AAGTTACTAG 
Length570
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16055301.. 16055870
Download Sequence
A.thaliana
AGI-codeAT2G35700.1
DescriptionERF family protein 38
TAIR curator summaryencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism.
Alias[ATERF38][ERF38][ERF FAMILY PROTEIN 38][ERF family protein 38]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg483055 Protein kinase superfamily protein
21.166 Ahg486231
32.3265 Ahg947573 Protein of unknown function (DUF604)
40.9878 Ahg474990 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
55.857 Ahg339091 Exostosin family protein
61.0082 Ahg492264 fibrillarin 2
64.9923 Ahg892851 alpha/beta-Hydrolases superfamily protein
66.3325 Ahg951091
69.3253 Ahg919100 AUX/IAA transcriptional regulator family protein
70.746 Ahg321364 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression