Detail



ID : Ahg482719

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482719|fgenesh2_kg.4__1779__AT2G37270.2
Sequence
GTCTGAGCTT CCTCCTCTTC TTCTTCTTCA AGCCGCAGCC AAAGATCCCT ACTTTGCTAA TCTTCTACTG ATCCTCCAGT CATGGCCACC TCCGTAGAAA TCGACGCCGA GATTCAGCAA CAGCTTACCA ATGAGGTTAA GCTCTTCAAC CGTTGGAGCT TTGATGACGT TTCGGCTACT CATATTAGTC TTGTGGACTA CATTGGTGTT CAGCCAGCGA AGCACGCAAC TTTTGTTCCT CACACTGCTG GGAGATACTC TGTGAAGAGG TTCAGAAAGG CTCAATGCCC AATTGTTGAG AGGCTCACTA ACTCTCTCAT GATGCACGGA AGGAACAACG GTAAGAAGTT GATGGCTGTC AGGATCGTCA AGCATGCCAT GGAGATCATC CACCTCTTGT CTGACTTGAA CCCAATTCAA GTTATCATTG ATGCCATTGT TAACAGTGGT CCTCGTGAAG ATGCTACAAG GATTGGATCT GCTGGTGTGG TTAGGAGGCA GGCTGTTGAT ATCTCTCCTC TAAGACGTGT GAACCAAGCA ATCTTCTTGC TCACCACTGG TGCACGTGAA GCTGCCTTTA GAAACATCAA GACAATCGCT GAGTGCCTTG CTGATGAACT CATCAATGCT GCAAAGGGAT CTTCCAACAG CTATGCCATC AAGAAGAAAG ATGAGATTGA GAGAGTTGCT AAGGCCAATC GTTAAGGGAT CTTTCTTTCC TCTAAGTTTG CATTATATCA AAAGAGTTTT TGTGTTGTTT CCATTAGCTT TGGATATGTT TCAGATGATC TCTCTATCTT TAATGAAGTT TTGACGCTTT TAAACGACTT GGGATCTTGA TCAATGAAAT GGTTTCATAT TTAAAGTTAT TTCATCTATA TATGTTTCAG TT 
Length892
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16882340.. 16883884
Download Sequence
A.thaliana
AGI-codeAT2G37270.1
Descriptionribosomal protein 5B
TAIR curator summaryOne of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.
Alias[ATRPS5B][RPS5B][ribosomal protein 5B]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg496177 GTP binding Elongation factor Tu family protein
10.4881 Ahg946494 Ribosomal protein L23/L15e family protein
10.5357 Ahg470404 cytosolic ribosomal protein S15
11.7473 Ahg477492 Ribosomal protein S7e family protein
17.2047 Ahg477755 Ribosomal protein S3Ae
19.2354 Ahg906639 Ribosomal protein L2 family
23.2164 Ahg486011 Ribosomal protein L35Ae family protein
24.6577 Ahg487529 Ribosomal protein S4 (RPS4A) family protein
26.7208 Ahg478157 ADP/ATP carrier 1
28.1425 Ahg487866 Ribosomal protein S6e
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression