Detail



ID : Ahg482843

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482843|fgenesh2_kg.4__1903__AT2G38320.1
Sequence
TTTAGAATTT ATATTAGGAA AATGATATAG ACAGCTACTG AAATGTGATT GACCACCAAA CTACAAAATA ACTTCAAGAA GGCTGGAGTT AAAAGGCAAG TCAGAGAAAG ACACATCAAT ATAACCCAAA ACAAACATCA TAACAACAAC AATAACAAAC ACATAACCAA TGGTAAAGCG ACAACTGTTG ATGCTAGGTA TCAGAACTAG CTTTCATACT ATCGCCGCCG TGCTTGTGGC CGGATTAATA GTCACTGCCG TGTTTATGTC CCGAAACGGT TTGCTAAAGG AAAACCCTCA AAGAGACAGT GTACCGGACC TCAGCGGCGA CAGTAGCAAA GAATGTAATT TGTTCGAAGG GAAATGGGTA TTTGATAATG AATCATACCC TCTTTATAAA GAAGAAGATT GCAAGTTTAT GTCTGACCAG TTGGCTTGTG AGAAGTTTGG GAGAAAAGAT TTGAGTTACA AATTCTGGAG GTGGCAACCT CACACGTGTG ATCTTCCCAG GTTTAATGGA ACGAAGTTGC TGGAGAGGCT AAGAAATAAG AGGATGGTAT ACGTAGGAGA CTCTTTGAAC AGAGGCCAAT GGGTATCGAT GGTGTGTATG GTTAGTTCGG TCATTACAAA CCCAAAGGCG ATGTATATGC ACAACAATGG CTCTAACCTC ATCACCTTCA AAGCCCTCGA ATACAATGCG ACAATAGACT ACTATTGGGC TCCTTTACTG GTGGAATCCA ACTCGGACGA CCCGACAAAC CATAGATTTC CTGATCGGAT AGTTCGGATC CAATCGATAG AGAAACATGC GAGGCATTGG ACGAACTCTA ATATCATTGT TTTCAACTCT TATTTATGGT GGAGAATGCC TCATATCAAG TCACTGTGGG GATCATTTGA GAAGTTAGAT GGAATATACA AGGAAGTGGA GATGGTGAGA GTTTATGAGA TGGCTTTGCA AACACTGTCT CAGTGGTTGG AGGTTCACGT TAACCCCAAT CTTACCAAAC TTTTCTTCAT GTCCATGTCT CCCACCCATG AAAGGGCTGA AGAATGGGGA GGAAAACTTA ATCAGAACTG TTATGGAGAA ACTAGTCTAA TAGATAAAGA AGGATATACT GGAAAAGGTT CAGATCCAAA GATGATGAGA GTCTTAGAAA ATGTGCTTGA CGGGCTAAAA AATCGAGGAT TAAATATGCA GATGATAAAC ATTACGCAAC TATCAGAGTA TCGAAAAGAA GGTCATCCTT CGATCTACAG AAAACAATGG GGAACAGTGA AGGAAAATGA ACTCTCGAAT CCAAGTAGTA ATGCAGATTG CATACATTGG TGTTTGCCTG GAGTTCCTGA TGTTTGGAAT GAACTCCTTT ATGCTTATAT TCTTGACCAT CACTCTAGTT GAAAACTACT ATTACATCTT TTTTTTTTCT TCTACCTATT CCACTTCAAT TGTACAGCTG ATTTTATTAC TCTCACTTAT TTT 
Length1483
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17638958.. 17641694
Download Sequence
A.thaliana
AGI-codeAT2G38320.1
DescriptionTRICHOME BIREFRINGENCE-LIKE 34
TAIR curator summaryEncodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Alias[TBL34][TRICHOME BIREFRINGENCE-LIKE 34]
Gene coexpression
MR
MR Locus Description
43.2897 Ahg473654 auxin response factor 14
43.4741 Ahg891767 Vesicle transport v-SNARE family protein
49.5681 Ahg487980 CTC-interacting domain 5
82.813 Ahg346008 Actin-like ATPase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression