| Annotation |
|---|
| Description | jgi|Araly1|482865|fgenesh2_kg.4__1925__AT2G38560.1 |
| Sequence |
CTATCTTGTT CGTCGCGACT CAAACGAGGT TCCGCCGATT ATTATCCTTT TTCTCCATTC TTGAGAGATT TTGTTGGATT GTTTTTGTTC TGAGTCGTCT TGGATCTGTC GGTGTTGGCG CTTTGTTCTT GGAGCTAGGG ATTTGAGGGA CGATGGAAAG TGATTTGATT GAATTGTTCG AGGGAGCTAA GAAGGCAGCC GATGCGGCGG CTCTCGACGG TGTTGCCTCT TCAGGTCCGG AGGTTTCTCA ATGTCTCGAT GCCCTTAAAC AACTCAAGAA GTTTCCTGTC ACATACGATA CGCTTGTTGC GACTCAGGTG GGAAAAAAGC TGAGGTCTCT TGCAAAACAC CCTATTGAGG AGATCAAAAG CGTAGCTACT GATTTGCTTG AGATATGGAA GAAAGTTGTC ATTGAAGAGA CAGCCAAGGC TAAGAAAACT GAAGGCACTA ACGGTTGTAA AGAGGCTAAG GTGAATAAGA TGGATGTTGA TAAGCCTTCA AATCCCGCGC CTGTTAAAGT CCAGAAACTT CAGAGGGGTG ATTCGGCTAA GAGTATCAAG GTTGAGAGAA AGGAACCAGA CAATAAAGGC GTTACCGGTG TCAAGATAGA GAGAAAGGAA CCAGACAACA AAGTCACTAA TGGAACCAAG ATAGATTATC GTGGTCAGGC TGTTAAGGAT GAAAAGGTCT CAAAGGACAA CCAATCAAGT ATGAAAGCTC CAGCTAAGGC ACCTAATGCT CCTCCAAAAC TAACTGCAAT GCTCAAATGC AATGATCCTG TGCGTGACAA AATCCGTGAG TTGCTTGTAG ATGCGTTGTG CAGGGTTGCT GGAGAAGCTG ATGACTATGA GAGAAAGTCA GTAAATGCTA GTGATCCACT CCGTGTTGCT GTCTCAGTGG AATCACTGAT GTTTGAGAAA TTGGGTCGCT CAACTGGAGC TCAGAAGCTT AAGTACAGAT CTATAATGTT CAACCTGAGG GACGGTAACA ACCCGGACTT AAGAAGGAGG GTTCTCACCG GGGAGATTTC ACCAGAGAAA CTCATCACAT TGTCTGCTGA AGAAATGGCA AGCGACAAGA GGAAACAAGA GAACAATCAG ATAAAAGAGA AAGCCCTGTT TGATTGCGAG CGTGGTCTTG CAGCAAAAGC ATCTACCGAC CAGTTCAAGT GCGGGCGGTG TGGTCAACGC AAATGCACCT ACTATCAGAT GCAAACAAGA AGTGCTGATG AGCCAATGAC GACCTATGTT ACATGTGTTA ACTGTGACAA CCACTGGAAG TTCTGTTAAG GAGATCTCTG TGTGTCTTTG TATTTCATGA GACCATGTTA AGACATAGAG GCTCTGATTG ATTAATCAGG AGCTTCATGT CCATTTGCCA TCATTCCGTG AATGTTCCGG CTCCGATGTT TGTTTTAAGG ATATCATTCA ATGTCTTAGA GATTAGTAAG TAGGGGTATT TACTAATTTA GGTGTTTGTA GCTCTTATTT CTTTTGATTC TCTTCTTCCA AACTGTCAAC TCAACTTTCC TGCAGATTTT ACCAAGTTTT GAAGTTTATT T |
| Length | 1561 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 17757430.. 17759498 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G38560.1 |
| Description | transcript elongation factor IIS |
| TAIR curator summary | Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy. |
| Alias | [RDO2][TFIIS][REDUCED DORMANCY 2][transcript elongation factor IIS] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.48331 |
Ahg495572 | RNA-binding protein 45A |
| 8.83176 |
Ahg485514 | PAP/OAS1 substrate-binding domain superfamily |
| 8.94427 |
Ahg474164 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| 9.16515 |
Ahg480003 | Homeodomain-like superfamily protein |
| 9.59166 |
Ahg489126 | Adaptor protein complex AP-2, alpha subunit |
| 11.1355 |
Ahg479946 | MUTL protein homolog 1 |
| 13.1909 |
Ahg485584 | Dihydrolipoamide acetyltransferase, long form protein |
| 13.6382 |
Ahg482091 | ARM repeat superfamily protein |
| 16.8819 |
Ahg941044 | Bromodomain transcription factor |
| 18.1108 |
Ahg332814 | Homeodomain-like/winged-helix DNA-binding family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|