Detail



ID : Ahg483112

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483112|fgenesh2_kg.4__2172__AT2G40550.1
Sequence
TTTGAGATAT GGGAGGACCA GCTTACGATT GTCTGACTAA CCCTTTAGGA GCCGTCCGAT TCTCCTTCGT TAATGCTCTG TCTTCTGGCT ATGATCCGGC GTCGTCTATC GGAAAAGACT GGGGCGTCGT CGATTTGTTC CGTCACTACT TCTCCGACGA ATCTGCTATC TCCCAGGTTC CAGTTCTTGA TTCGTCAAGT ATTAAGTGGG TGCAACCCAA GACTCTTGTT CGGTTTCGTG GAATGATACA GGACATGCTT GGAAATGAAT TCTATGCTGG TGCTTACAAG GATGATACAA CATGGAGAAC AAACAAGTAC AGTGATGTAT CACAGTTTCC TGAGGGTTCT TCTACTGAAA TGCAAGTTTG GGAGCGTCGC TTACTATACT GTGTTCCAGT TCCGGGACAA AACCAATGGA CTGAATGTTC TTCTCAAGAG CTGAAGAACC GGTTTTTGGA TCTAACTGTC CAAAACAGGG AAAAGCGTGT GAGGGTGGAT GAAGAAATGA CTGATTCCAT GGATTCCAAT ACTTTAGAAG CTGGGCTTAA TGGCTCTCCT TTCAAGAAAA TGAAAGTGGG GGAAGCTACT TCATCAGCTT CAGAATCTCA GGTTCCACAA AGTTCTGGTA TTCCACCTGC TACAAGTACA GAGTCTCTAC CTTGTCTTGT GAAGATGTAT GATTCTCCGG AGTCAGATTT GAAGCTAAAT GATGTGGTTG AATTCCTTGG AGTGTTGACC TTCGATCCAA TTGTTATGAT GGATACAGAT TCACTTGATG AAAACTCTGA TGATCTTTCT GAAGCTGAAT CTGTTCAGAT GCCCTCTGGA AAGGTCCCAC GCCTCCATTG TCTTATCCAT AGGAAGCTTG AAACACAACA TTTCCTGCAT GGTTCTTCGT TATTACCAGA GCCAAAATCC CCCCAAATTT TCAAAGAGAT AAGAGAGAGT TTGATGAAGT ACCTTACCAG TCTACTTGGG AACGATCACA TTGCCGCACA GTTCCTATTA TTGCATCTCC TGTCGAAGGT GAATGGAAGA GTAGATAATG TTGCTGTTGG GAAGCTTTCG CTTAATCTCA TACACCTTAA CAAAGAAAGC ATGTCTATCT TTGGTACCCA GCTCAGTGAT GCCCTCAAAA GCCTCCTACC ATTCACACAA TCTATACCAC TTACTATTGA GTATCTGAAC ACTGCCTCCT TCGGTCCCAA GAAAGACTAT CGAATAAACA GATTGATGCC TGGAGTCTTA CAAATTGCTG ATGGTACGCA CTTGATATTG GACGAAACAG AATTGCAACC AGGCACCTTG AACTCTGTTG GAGTTGAGAA TGCAAATCTG CTCAAAAACC TCTTGGAATG TCAGAAGGTG GAGTATGATT TCCAATATTA CAAAATGGAA ATGGCCACTG ATGTTCAAAT GCTCATCTTC TCCGAGGGGA AATCGAACAT AATGCCCGCC GATTTGGTTT TACCTTTTCA ACCTTCCCAA GTGAATTCAT TGGAAGTGAT CACACCAGAT ACAGCAGAAG CTTGGAGGTG CTACTTAGCT ACATGCAAAT CGTTATCACA CTCCATTGGG CAAGAGTTGC AACAGGTGGT AGAGAATGAT TTGGTTGCAG CTAGACAAAC GGATCGTAGT TTAGGCAGCC AAGACTTGAG CAGATTGTTG ACAATGGCTC GTATGATGTC TGTGAGTTAT GGTGAGACTA CGCTTTCACT AGAGCACTGG CAAATGGTGT TGGAACTAGA AAGACTTAGA AAGGAGAGGC TCAAGTAAAA CCACCGAAAC GAAGAAGGGA GACTAAAGGT TTCGAGATTA TTTGGATCTT GTAATTTTCA CTAAGTTATT TTCCTATCTA TTTATAAGGT TAAACTTTGA GCGTTTGACT GGTAATGGAA ATTGTTTGA 
Length1909
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18782606.. 18785877
Download Sequence
A.thaliana
AGI-codeAT2G40550.1
DescriptionE2F target gene 1
TAIR curator summaryEncodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.
Alias[ETG1][E2F target gene 1]
Gene coexpression
MR
MR Locus Description
13.784 Ahg481044 ribonucleotide reductase 1
14.2829 Ahg494345 Minichromosome maintenance (MCM2/3/5) family protein
18.7617 Ahg475225 cleavage and polyadenylation specificity factor 73-I
19.2873 Ahg487869 Histone superfamily protein
22.6274 Ahg496254 Replication factor-A protein 1-related
32.8481 Ahg922933 minichromosome maintenance (MCM2/3/5) family protein
39.4968 Ahg490375 Minichromosome maintenance (MCM2/3/5) family protein
44.0908 Ahg952212 ribosomal protein L23AA
47.1381 Ahg496418 structural maintenance of chromosomes 2
48.9285 Ahg945085 O-Glycosyl hydrolases family 17 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression