Detail


ID : Ahg483627

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483627|fgenesh2_kg.4__2687__AT2G44980.2
Sequence
ATGTCAAAAG AGAGTTCACC GCCAAAAGTC CCCTCCACGA TGGAGTACGA ACGGCGACTT GAAGCGGCGG CGAAAATTAT ACTCGAGAAG GAGGCGAAAT CACCTCCGGA TTGTAGAGAA TTTGGGGTCA CGGCGACTCT GAAGCCTCAC CAAGTCGAAG GTGTCTCTTG GCTTATACAG AAATATCTAC TCGGCGTCAA TGTCGTTCTC GAATTGGACC AGATGGGATT GGGAAAGACT CTCCAAGCAA TTTCTTTCCT GAGTTATTTG AAGTTTCATC AAGGCTTGCC TGGGCCATTT CTCGTGCTAT GTCCCTTGAG CGTAACGGAT GGTTGGGTAT CAGAGATAAA TAGGTTCACT CCAAATCTTG AAGTTCTTAG ATATGTTGGT GATAAGTATT GCCGTCGGGA TATGCGTAAG TCAATGTATG ATCATGTCAA GAAGAGTTCT AAGGGACATT TGTTACCATT TGATGTGTTG TTGACAACAT ATGACATAGC ACTGGTCGAT CAGGACTTTC TTTCTCAAAT CCCTTGGCAT TATGCTATAA TTGATGAAGC TCAAAGACTC AAGAATCCTA ACAGTGTTCT GTATAATGTC TTACTTGACC AATTCCTCAT TCCACGACGT CTCTTGATTA CTGGCACACC TATTCAGAAC AATCTTACCG AACTTTGGGC TCTGATGCAT TTTTGCATGC CACTAGTTTT TGGGGCACTG GACCAGTTCC TTGTCGCATT CAAAGAGACT GGGGAGGGTC TATCAGGTCT TGATGTATCT AATGACAAGG AAACATATAA GAGTTTGAAG TTCATCTTAG GTGCCTTTAT GTTGAGGCGT ACAAAATCTT TGCTCATTGA GTCTGGAAAT CTGGTGTTGC CACCTCTCAC GGAGCTAACT GTAATGGTTC CGCTCGTCAG TCTTCAAAAG AAGATATATA CTTCCATATT GAGGAAAGAG CTTCCAGGGC TTCTCGCACT GTCTTCTGGA GGATCCAATC ATACATCTTT ACAAAATATT GTGATACAGC TTAGAAAAGC ATGTAGCCAC CCTTACTTAT TTCCAGGTAT TGAACCGGAA CCTTTTGAAG AGGGTGAACA CCTTGTTCAG GCAAGTGGTA AGCTTTTAGT TTTGGATCAA TTGCTCAAGA GGCTCCATGA TATTGGTCAT CGTGTCCTCC TCTTTTCCCA AATGACCTCA ACACTTGACA TTTTGCAGGA TTTTATGGAG CTTCGTAGAT ATTCTTATGA GCGCCTTGAT GGATCAGTAC GGGCTGAAGA ACGATTTGCT GCGATAAAGA ATTTCAGTGC AAAAGCAGAA AGAGGATTGG ATTCTGAAGT TGATGCAAGC AATGCCTTTG TTTTTATGAT CTCTACAAGA GCAGGGGGAG TCGGTTTGAA TCTTGTTGCT GCTGATACTG TTATATTTTA TGAACAAGAC TGGAACCCAC AGGTGGATAA ACAAGCTTTG CAACGAGCTC ATCGAATTGG ACAAATCAGT CATGTGTTGT CTATAAACCT CGTTACTGAA CATTCTGTGG AAGAGGTTAT TTTGAGGAGG GCAGAGAGAA AGTTGCAGCT TAGTCATAAT GTTGTGGGAG ATAATATGGA AGAGAAAGAC GAAGATCGTG GTGATTTGCG GTCTCTAGTG TTTGGTTTAC AAAGGTTTGA TCCCGAGGAG ATTCACAGTG AAGAGTCTGA TAACCTGAAA ATGGTAGAAA TAAGTTCTCT TGCTGAGAAA GTTGTTGCAA TACGTCAAAA CGTTGAACCG GACAAGGAAG CAAGAAAGTT TAAAATTGAT TCGAGCGACA CTTTGCGAGG AAATTCATCA TCGGCATGTC TGGATTCCGA GCTTGATGAA GCTTCTTACC TTTCATGGGT TGAGAAATTG AAGGAAGCTT CACGATCAAG CAAGGATGAC AAAATTATGG AGTTGGGAAA TAGAAAGAAC TTATCTGAGG AAAGAAATCT GAGAATTGAG GCTGCCAGGA AAAAGGCAGA AGAGAAGAAG TTAGCCAGTT GGGAAGCACA CGGTTATCGT TCTTTGTCTG TGGAAGAACC GATCTTCCCT GATGATGTTG ATTCCAGCTC AGATGCAGGA TCTGTTAACT TTGTCTTTGG AGACTGTACA AATCCATCGA CAGTCTCTCA TGAGCCAGCA ATCATATTCA GCTGTGTTGA TGACTCTGGA AACTGGGGAC GAGGTGGAAT GTTTGATGCT CTGTCAAAAC TTTCTAATAC TGTACCCGAT GCGTATCACC GAGCATCTGA GTTTAAAGAC CTCCATCTTG GAGACCTGCA TCTCATAAAA ATTGATGACA GTGATGATCA ACAAAACACA GAAGAAAGTA AACCTCTTTG GGTGGCAGTT GCAGTAACAC AATCTTATAA CCCGAGGCGT AAAGTCCCAC GTAGTAGCAT TTCAATTCCA GACCTTGAAC GTTGCTTGGC CAAAGCTTCA TTCTCCGCTT CTCAGAAATC AGCTTCACTC CACATGCCAC GTATTGGTTA CCAAGACGGA TCAGACCGAT CTCAATGGTA CACTGTTGAA CGTCTTCTTC GCAAATACTC CTCCATCTTC GCCGTCAAAA TATTCGTGTA CTACTACCGT CGATCTCCCT GA
Length2622
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20803012.. 20807349
Download Sequence
A.thaliana
AGI-codeAT2G44980.2
DescriptionSNF2 domain-containing protein / helicase domain-containing protein
TAIR curator summary
Alias[ASG3][CHR10][ALTERED SEED GERMINATION 3][chromatin remodeling 10]
Gene coexpression
MR
MR Locus Description
11.1355 Ahg329184 MA3 domain-containing protein
15.748 Ahg321462 actin 1
21 Ahg927390 Protein kinase superfamily protein
23.0868 Ahg486638 Phosphoenolpyruvate carboxylase family protein
23.8747 Ahg484163 AAA-type ATPase family protein
25.1396 Ahg935043 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein
30.7246 Ahg329753 Peptidase S41 family protein
36.9865 Ahg929506
43.7493 Ahg484030 Leucine-rich repeat protein kinase family protein
48.2183 Ahg477212 tetratricopeptide repeat (TPR)-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression