Detail



ID : Ahg483768

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483768|fgenesh2_kg.4__2828__AT2G46210.1
Sequence
ATCGATTCCA AAACAGTAAA CAAACAAAAA AAATACAAAT ATAAAGAAGA AAAGGCGTAG AATCGATTCA AAATCTGTGA GTTACGAATC CATAGAGAGA AAGGTTTTGC ATTTGCAACC TTTCTCAATT TGGTCTCTTT CTCTTGTTCA ACAATGGCGG ATCAAACGAA GAAGAGATAC GTTACAAGCG AGGATTTGAA AAAACACAAC AAACCTGGAG ATTTATGGAT ATCGATTCAA GGTAAAGTTT GCGACGTTTC CGATTGGGTT AAATCTCATC CCGGAGGCGA AGCAGCGATT CTCAATCTCG CCGGCCAAGA CGTCACCGAC GCGTTCATCG CTTACCATCC CGGAACCGCA TGGCACCACC TCGAAAAGCT TCACAATGGC TATCACGTGA GAGACTTCCA CGTGTCTGAC GTGTCACGTG ATTACCGCCG ATTAGCCGCC GAGTTCTCCA AACGCGGCCT CTTCGACAAA AAAGGTCACG TGACTCTCTA CACGCTCACG TGCGTCGGTG TAATGCTCGC GGCGGTTCTC TACGGCGTTT TGGCGTGTAC CAGCGTCTGG GCTCACCTCA TCTCCGCCGT CTTACTCGGC CTCCTCTGGA TCCAGAGCGC TTACGTCGGC CACGATTCCG GTCACTACAC GGTGACGTCG ACCAAACCGT GTAATAAACT AATCCAGCTT CTCTCCGGTA ACTGTCTCAC CGGAATCTCA ATCGCGTGGT GGAAATGGAC GCACAACGCT CACCACATCG CTTGTAACAG CCTTGATCAC GATCCAGATC TACAACACAT CCCGATCTTC GCCGTCTCAA CCAAATTCTT CAATTCGATG ACGTCACGTT TCTATGGCAG GAAATTAACA TTCGATCCTC TAGCTCGATT CTTAATCAGC TACCAACACT GGACATTTTA CCCAGTAATG TGCGTCGGAA GAATCAATCT CTTTATCCAA ACATTCCTAT TGCTATTCTC GAAACGCCAC GTCCCAGATC GAGCCTTAAA CATCGCCGGA ATTTTAGTTT TCTGGACATG GTTCCCGCTC TTAGTCTCGT TTCTTCCAAG TTGGTCAGAG AGATTCATCT TCGTCTTCGT TAGCTTCGCC GTCACTGCGA TTCAACACGT TCAGTTCTGT TTAAACCATT TCGCAGCAGA TGTTTATACC GGTCCACCTA ACGGAAACGA TTGGTTCGAG AAACAAACCG CCGGTACGCT TGATATATCG TGTAGATCGT ATATGGATTG GTTCTTTGGT GGATTGCAGT TTCAGTTAGA GCATCATTTA TTTCCTCGGC TTCCTCGTTG TCATCTCCGG ACAGTATCTC CGGTGGTTAA GGAGCTTTGT AAGAAGCATA ATCTTCCTTA TAGGAGTCTT TCGTGGTGGG AGGCTAATGT GTGGACGATT AGGACTTTGA AGAATGCGGC GATTCAAGCT AGAGATGCGA CTAATCCTGT GTTGAAGAAC TTGCTTTGGG AAGCTGTGAA TACTCATGGC TAAAAAGGTG TTTCGTTTGT GGACTACTTC TTAATTAGTT TGAATCTGTT TTAGGTGTAA CTCTACCATG ATCAAAAATT TTCTGCTGAG TTTAT 
Length1595
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21278535.. 21280180
Download Sequence
A.thaliana
AGI-codeAT2G46210.1
DescriptionFatty acid/sphingolipid desaturase
TAIR curator summary
Alias[AtSLD2][SLD2][sphingoid LCB desaturase 2]
Gene coexpression
MR
MR Locus Description
10.4881 Ahg481718 Argonaute family protein
12.6886 Ahg951254 EXORDIUM like 2
16.6132 Ahg484755 RNA-binding KH domain-containing protein
20.7364 Ahg491154 Protein kinase superfamily protein
24.1661 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
24.4949 Ahg923506
24.4949 Ahg944521
26.4386 Ahg473629 Major facilitator superfamily protein
26.8328 Ahg903199 HSP20-like chaperones superfamily protein
29.3428 Ahg921875
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression