Detail



ID : Ahg483804

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483804|fgenesh2_kg.4__2864__AT2G46495.1
Sequence
ATGACTTTCT CAAAACAACT CTTTCTTTAC CTCTTCTTCC TCTTCCCTCT CCTACACGCT TCACACACAA ATCAATGCTC TTCTTCCTCG TGCGGTCTTG ACGATGTCCA TGTCCGTTTC CCTTTTTGGT TACTCTCGAA ACAACAGGAG TTCTGTGGCC ATGCCGGATT TAATCTTCAA TGCACAAGTA GTCTCACGAC AGCTCTCAAG CTTCCTAATT TCGGAACATT TCTTGTCCGA GAGATCGACT ATATAAGCCA GCAGATTCGT CTCCATGACC CTGAAAGTTG CTTGGCAAGA AAGCTTTTGA CCTTTGACAT ATCAGGATCC CCTTTCTCTG CTCTCTACCT TGCCAGCTAC ACGTTCTTGA GCTGTCCTAA TGAGGTAGCA AAGTCGTCCA GGTTTGACTC CATCCCATGT TTAGGCAATT CAACGACCTC GTTCTTGGCT ACAACTAGTT TGGATCTCGC AAAATCTATG CTGCCTTCTT GTCAGATCGT CAAGACATCA ACTATTCCGG TTTCTCGGCG AGTTACTGCC GGAAAATCAA GATTCTCGAC TGATGTCAAC GATAAAGACC TTTGGCTGAA ATGGGATTCA CCAAGTTGTA GCAATTGTGA GAGGGATTAT TTGAGATGTG GATTCATAAG CAATACTTCT CTCCAAGTCA AATGCTTCCC ATTTGAAAAA TCCGGCAACA ACAACACGAG ACTACAAGTG CTTAAAATTA TGATCCTGAG CATAATTGGA CCGGTCATGA TCTTTGCTAC GTGTATTGCA ATCGGAGTTT GCACCTCTGA AAGATTCGCT TCCCGGATAC AACGCAACGT GGCTATCGCC GCCTTGCAGC CAAACGAGGT TATAATCACG ACGGGCCTTG ACGAGTCTAC AATAGAATCA TATAAGAAAA TGGAATTAGG AGAGAGTAGA AGATTACCGG GAACTAATGA TATTGTTTGC CCCATTTGTT TATCGGAGTA TGTTAGCAAA GAGACCGTGC GGCCACTCAG ATGTGGACCC TTAGATGTCC CCATTCGTTT TCCTTTCTGT GACCATGCAC AATTCAACCT CCACTGTACC GATCTCAATA AGACAGTCCT AGAACTTCCT ATGTCCGGAA CATTTCTTGT CCATGATATC GACTACAGAA GGCAAAAGAT TTATATCAAC GACCCTGAAA ACTGTTTGGC TAAACGGCTT TTAACCTTCA ATATTTCAGG ATCTCCTTTC TCTCCTCGCT TCGAGATCTT CTACACATTC TTGACTTGTC CTAATGAGGT CGTGTTGCCG TCTTGGTATC CGTCCATTCC TTGCCTAAGC AATTCCACCT CCTCCTTCTT CGCCACGTCT AATTTTGCTC TCGCACAGTC TATGCTACCT TCTTGTCAGA TCGTGAAGAG ATTACATGTT CCCTCTAATT CGCCGTTTGG AGAAACAAGA TTCTCGAGCT ACCTCAACAA TCAAAACCTC CTGTTGGAGT GGGACTCGCC TGATTGCAGA GGTTGTGAGG TAGATTACTT GAGATGTGGA TTTAAGAACA AGGCATCCCT CGAAATCAAA TGCTTTGATG CTAAAAAATC CGGTCATTTA AGTAGTGGAG TACTGGTACT AGTTATAAGC TTGTCAGCAG TCACCGTCTT TGTCTTTCCT ACTTGTATCG CTATCCGCCT TTACAACTCC GAAAGCTTCG ATTCCCTAGC TATCGCAGCC GCGACCGTGA TGCAGCAGCC AAGAGAGGTT ATGACCACGA GGGGTCTCGA CCAATCTACG ATCGAAACAT TCAAGAAAAT GGAGTTGGGA GAAAGTAGGA GGATTTCCGG GACTAATGGT ATTGTATGTC CGATTTGTTT ATCAGAGTAT GCGAGCAAAG AGACCGTACG GTTCATACCG GAATGTGACC ATTGCTTTCA CGTGAAATGT ATTGATGTAT GGCTCAAGAT TCATGGTTCG TGTCCTCTTT GTCGGAACTC ACGTGCGTGA 
Length1980
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21410862.. 21416293
Download Sequence
A.thaliana
AGI-codeAT2G46495.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
38.0263 Virus0596
47.6235 Ahg934344
51.8749 Ahg497288 WUSCHEL related homeobox 1
55.6597 Ahg945476 Peroxidase superfamily protein
56.3738 Ahg936215 Protein of unknown function (DUF784)
57.0263 Ahg486698
62.6099 Ahg484734
65.9318 Ahg479288 WUSCHEL related homeobox 1
67.5278 Ahg487893
78.5493 Ahg939137
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression