| Annotation |
|---|
| Description | jgi|Araly1|484115|fgenesh2_kg.5__107__AT2G01930.1 |
| Sequence |
CTTCTCTTTC CTCTCTCTTC TTTCTTTCTC TTTCCCAATC TCTCTCAGGT TTCTCTCTCC TCTCTCTCTC CAGGAGGTCA AAAAATTCCT TAAAGAGCCG TTTAGACCAA ACCCATGTTT ATAATCACAA TGGATGATGA TGGATTTCGC AATTGGGGAT ACTATGAACC AGCGGCTGCT TCATTTAAAG GTAATCTTGG TTTGCAGCTT ATGTCTACTA TTGACCGGAA CACTAAACCG TTTTTACCCG GGCGTGAATC GAATCTGATG ATCGGTTCAA ACGGTTCGTA TCACCCGCGA GAGCACGACA TGAACTATAG CTGGATTAAT CAACCCAAGG ACAACAAGTT CTTCAACATG TTGCCTATAA GCACCCCGAA TTACGGGAGT GTGATGTCCG AAACATCTGG TTCGAATTCG ATGCAGATGA TACATCAACC GGTTGTGAAC TCATCCCGGT TTGAGGAGAT TCCGATCCCT CCTCGTGAAG ATGAAATCGT TCAGCCTAGT AAGAAGAGAA AGATGAGAGG TAGCATCTCA ACACCAACAA TACCGAAAGC TAAGAAGATG CGTAAACCGA AAGAGGAGCG CGATGTTGCT AGTAGCAATG TTCAACAGCA GCGTTTGAAA CCGGTTAAGA AGAGTGTTGA TCTTGTGATT AATGGTGTGA GTATGGACAT TTCTGGTTTA CCTGTACCGG TTTGCACTTG TACTGGAACT CCTCAGCAAT GTTACCGTTG GGGATGTGGC GGATGGCAAT CCGCTTGTTG CACAACTAAC ATTTCGGTGT ATCCTTTACC GATGAGTACT AAGAGACGCG GCGCAAGGAT TTCAGGTAGG AAGATGAGTC AAGGCGCGTT TAAGAAGGTC CTAGAGAAAT TAGCAACAGA AGGTTATAGC TTTGGGAATG CGATTGATTT GAAGAGTCAT TGGGCTAGAC ATGGAACCAA TAAGTTTGTC ACGATCAGAT AGTCATTGAT CGTGTATATA CAACAACTTG TGACCTTTGT TTCCCTTCTT CCTCTTCAAG GTAACTTCTT CGGTTTAGGG TTTGAATCAT ATCTTAATTC ATATTCTTTC TTTTTCTTTT GCAACTATTT CATTCATCTT TAGGTCTTAA ATGTTGACTT GTAACATTAG ATGTTGTTTT GATAAAATGT TGTTATGTTA AACAATTTTA ATG |
| Length | 1183 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 528658.. 530396 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G01930.1 |
| Description | basic pentacysteine1 |
| TAIR curator summary | BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant. |
| Alias | [ATBPC1][BBR][BPC1][BASIC PENTACYSTEINE1][basic pentacysteine1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.16515 |
Ahg491382 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| 12.0416 |
Ahg477718 | Nucleotidylyl transferase superfamily protein |
| 14.6969 |
Ahg332076 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
| 15.4919 |
Ahg474131 | F-box family protein |
| 15.5885 |
Ahg950590 | smr (Small MutS Related) domain-containing protein |
| 20.9762 |
Ahg481586 | ETHYLENE-INSENSITIVE3-like 1 |
| 21.9089 |
Ahg926121 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 31.4643 |
Ahg488264 | bromodomain and extraterminal domain protein 9 |
| 39.064 |
Ahg324546 | homeodomain GLABROUS 1 |
| 40.6202 |
Ahg930127 | Protein phosphatase 2A regulatory B subunit family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|