Detail



ID : Ahg484148

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484148|fgenesh2_kg.5__140__AT2G02220.1
Sequence
ATGCGTGTTA ATCGTTTGTG TGTGATCGTC ATCGTCCTCA TAGAGCTACT ATGCTTCTTC TGTTCCTCGG AATCTCAAAC CACCGTCACG TGCCATTCAC ATGACTTCGA TGCCTTACGT GACTTCATAG CCAATCTCGA GCCAAAACCA GATGGTTGGA TCAATTCTTC TTCTTCTACA GATTGCTGTA ATTGGTCCGG AATCACCTGC AATACAAACA ACACAAGAAG GGTCACTAAA TTGGAGCTTG GGAACAAGAA GCTGTCGGGG AAGTTGTCTG AATCTCTTGG GAAGTTAGAT GAGATTAGGG TTCTTAATCT CTCTCGGAAC TTCTTCAAAG ATTCGATCCC TCTTTCGATT TTTAACTTGA AGAATCTACA GACTCTTGAT TTGAGCTCTA ATGATCTCTC CGGTGAAATC CCAAGAAGTA TAAATCTTCC AGCTCTGCAA AGTTTTGATC TTTCTTCAAA TAAACTCAAT GGTTCGCTTC CTTCTCATAT CTGCCATAAC TCTACTCAAA TTAGGGTTGT GAAACTTGCG GAGAACTACT TCGCTGGAAA TTTCACTTCT GGGTTTGGGA ACTGTGTTTT GCTTGAGCAT CTTTGTCTTG GTATGAATGA TCTTACTGGT AATATCCCTG AGGATTTGTT TCATCTCAAA AGTTTGAATC TTTTAGGGAT TCAAGAGAAT CGTATCTCTG GTTCGTTGAG TCGTGAGATT AGGAATCTCT CAAGTCTTGT TCGTCTTGAT GTTTCTTGGA ATTTGTTTTC TGGTGAAATC CCTGATGTGT TCGACGAAAT GCCTAAGTTA AAGTTTTTCT TAGGTCAGAC CAATGGATTC ATTGGAGGAA TCCCGAAAAC GTTGGCGAAT TCGCCGAGTT TGAATCTGCT TAACTTGAGG AACAACTCGT TATCCGGTCC TTTGCGGTTG AATTGCACGG CGATGATTGC TTTGAACTCT CTTGATTTAG GTACTAATAG ATTCAATGGG CCGTTGCCTG AGAACCTACC GGATTGTAAG CGGTTAAAGA ACGTTAATCT TGCGCGAAAC GTCTTCCATG GACAAGTGCC AGAGAGTTTC AAGAACTTCC AGAGCCTATC TTACTTCTCG TTATCGAATT CGAGTTTGGC TAATATCTCT TCTGCGCTTG GGATACTTCA GCATTGCAAG AACTTGACGA CTCTGGTTCT TACATTGAAT TTTCATGGAG AGGCTTTACC CGATGATTCG AGTCTTCATT TCGAGAAGCT TAAAGTGCTA GTTGTGGCGA ATTGCAGGCT TACTGGTTCA ATGCCGAGTT GGTTAAGCTC GAGCAATGAT CTTCAGTTGT TGGATCTTTC TTGGAACCGT TTAACAGGAG CTATCCCGAG CTGGATTGGT AGTTTCAAAG ATCTGTTCTA CTTGGATTTA TCTAACAACT CGTTTAGCGG AGAAATCCCC AAGAGCTTAA CTCAGTTGCA GAGTCTCGCT AGCCGTAATA TCTCATTCAA TGAACCATCA CCAGATTTCC CGTTTTTCAT GAAAAGGAAC GAGAGCGCGA GAGCGTTGCA ATACAATCAG ATATTCGGGT TTCCGCCAAC GATTGAGCTC GGTCATAACA ATCTCTCTGG ACCTATTTGG GAGGAGTTTG GTAATCTAAA GAAGCTTCAT GTGTTTGATC TTAAATGGAA TAAGTTATCA GGATCCATTC CTAGCTCTCT TTCGGGTATG ACGAGCTTGG AAGCTCTTGA TCTGTCTAAT AACCGTCTTT CGGGCTCTAT CCCGGCTTCT CTGCAAACGC TCTCGTTTCT GTCCAAGTTC AGTGTTGCTA ATAACAATCT CTCGGGAGTA ATCCCTTCTG GTGGTCAGTT TCAGACATTT CCAAACTCGA GCTTCGAGAG TAACAGTCTC TGTGGGGAAC ACAGGTTCCC CTGTTCTGAA GGTACTGACA GAACGTTGAT CAAACGGTCA AGAAGAAGCA AAGGAGCTGA CATTGGAATG GCGATTGGGA TCGCGTTTGG TTCGGTTTTC CTTCTCACTC TTCTCTTGTT GATTGTGTTG CGTGCTCGTA GACGGTCAGG GGAAGTTGAT CCGGAGATAG AAGAATCCGA GAGCATGAAT CGCAAAGAAC TCGGAGAGAT TGGATCTAAG CTTGTGGTTT TGTTTCAGAA CAATGATAAA GAGCTCTCCT ATGATGATCT TTTAGACTCA ACAAACAGTT TTGATCAAGC TAACATCATT GGCTGTGGCG GGTTTGGTAT GGTTTACAAA GCAACCTTAC CTGATGGAAA GAAAGTTGCG ATCAAGAAGT TATCCGGAGA TTGTGGTCAG ATCGAAAGAG AATTCGAAGC AGAGGTTGAA ACACTCTCAA GAGCACAGCA TCCGAACCTT GTTCTTCTTC GAGGATTCTG TTTCTACAAA AATGACCGGC TTTTGATCTA TTCGTATATG GAAAACGGAA GCTTAGACTA TTGGCTACAC GAGCGTAACG ACGGTCCAGC TTTATTGAAA TGGAGAACTC GGCTTAGAAT CGCTCAAGGC GCTGCAAAAG GGTTACTTTA TTTGCATGAA GGGTGTGATC CTCATATCTT ACACCGCGAT ATTAAATCGA GCAATATTCT TCTTGACGAG AATTTCAACT CTCATTTAGC AGATTTCGGA CTTGCGAGGC TGATGAGTCC TTACGAGACA CATGTAAGTA CAGATTTGGT TGGGACTTTA GGTTACATTC CTCCAGAATA CGGGCAAGCT TCGGTTGCTA CTTACAAAGG CGATGTTTAC AGTTTCGGAG TTGTGCTTCT CGAGCTTTTA ACCGATAAAA GACCGGTGGA TATGTGTAAA CCGAAAGGAT GTAGGGATCT GATCTCCTGG GTCGTCAAGC TGAAGCATGA GAATCGAGCA AGCGAGGTTT TCGATCCGTT AATATACAGT AAAGAGAATG ATAAAGAGAT GTTTCGGGTT CTCGAGATTG CTTGTTTATG TTTAAGCGAA AACCCGAAAC ATAGACCAAC GACTCAACAG TTAGTCTCTT GGCTTGATGA TGTCTAGAAG AAAGTGTAGG AAGTGATTTT CATACTTTTG AGATACAATG TAAATAGTTT CCAGAGAATA ATTTGTTTCT TCGTTTTCT 
Length3109
Protein Sequence
Protein Residue
Map Locationscaffold_5: 744990.. 748146
Download Sequence
A.thaliana
AGI-codeAT2G02220.1
Descriptionphytosulfokin receptor 1
TAIR curator summaryEncodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).
Alias[ATPSKR1][PSKR1][PHYTOSULFOKIN RECEPTOR 1][phytosulfokin receptor 1]
Gene coexpression
MR
MR Locus Description
19.8494 Ahg471920 glutathione S-transferase TAU 24
28.4605 Ahg929511 phospholipase D P1
30.9839 Ahg932344 Protein kinase superfamily protein
33.3617 Ahg947663 lysine histidine transporter 1
39.8999 Ahg475116 WRKY family transcription factor
41.9524 Ahg322706 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
45.299 Ahg475801
49.6387 Ahg495205 Tetratricopeptide repeat (TPR)-like superfamily protein
57.2364 Ahg492542 cysteine-rich RLK (RECEPTOR-like protein kinase) 18
59.7495 Ahg473306 Protein of unknown function (DUF668)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression