| Annotation |
|---|
| Description | jgi|Araly1|484212|fgenesh2_kg.5__204__AT2G02980.1 |
| Sequence |
GGCTTATCGT TATCCTCAAG ATTTGACAGT TAAACAACGA GAAGCTCAAA TTCAGAGCTT TAATGGCTAT ATCTTCTGCT TCACTAATAT CATCATTCTC ACACGCAGAA ACTTTTACTA AACCTTTAAA AATCGACACT GTGAATCCGA ATCCACCAAA CCCGATTCTT CTAATTTCCA AATGCAATTC TGAAAGAGAG CTGATGCAAA TTCAAGCTTA CGCGATCAAA TCTCATCAAG AAGATGTTTC CTTCAACACT AAGCTGATAA ATTTCTGCAC TGAGTCTCCA ACGGAGTCTT CAATGTCATA CGCACGCCAC TTGTTCGACG CAATGTCTGA ACCAGATATA GTGATTTTTA ATTCTATAGC TCGTGGGTAT TCTCGCTCCA CGAATCCTCT TGAGGTGTTT AATCTCTTCG TTGAGATCTT AGAAGATGAT CTTTTACCTG ATAACTATAC TTTCCCGTCT CTTCTCAAAG CTTGTGCAGT GGCAAAGGCA TTAGAAGAAG GTAGACAATT GCATTGTCTG TCGATGAAAT TAGGGGTTGA TGATAATGTA TATGTTTGCC CTACGCTTAT TAATATGTAC ACTGAGTGTG AAGATGTGGA TGCTGCTCGT TGTGTGTTTG ATCGGATTGT TGAGCCGTGC GTTGTTTGTT ATAATGCTAT GATCACGGGG TACGCGAGAA GAAACAGACC AAACGAGGCT TTATCTTTGT TCCGTGAAAT GCAAGGTAAG AACTTGAAGC CGAATGAGAT TACCCTTTTG AGTGTTCTGT CTTCTTGTGC TCTGTTGGGA TCGTTAGATC TAGGGAAATG GATACATGAG TATGCTAAGA AACATGGTTT TTGTAAGTAT GTGAAAGTAA ACACAGCTTT GATCGATATG TTTGCGAAAT GTGGTAGCTT GGATGATGCA GTGTCTATAT TTGAAGATAT GAGGTATAAG GATACACAAG CTTGGTCAGC GATGATTGTA GCTTATGCGA ATCACGGACA AGCTGAGAAT TCCATGTTAA TGTTTGAGAG AATGAGATCT GAAAATGTTC AGCCTGATGA GATCACGTTT CTCGGTCTGT TAAACGCTTG CAGCCACACA GGTCTCGTGG AAGAAGGGCG CAAGTATTTC TCACGGATGA TTAACGAATT TGGGATTGTT CCGAGTATTA AGCATTATGG TTCTATGGTA GATCTTCTTG GTAGAGCTGG AAATTTAGAA GATGCTTATG AATTCATTGA TAAGCTCCCG ATAAGTCCAA CACCGATGTT ATGGAGGATT CTTTTAGCTG CTTGTAGCAG CCATAACAAT TTGGAGCTAG CTGAAAAGGT TAGCGAAAGG ATCTTAGAGC TAGATGATTC GCACGGTGGC GATTACGTGA TCTTATCAAA TCTATACGCG AGAAACAAGA AATGGGAAGC TGTAGATTCT TTAAGAAAGG TGATGAAGGA TCGAAAGGCG GTTAAAGTTC CAGGGTGTAG CTCGATTGAG GTGAACAATG TTGTTCATGA GTTTTTCTCA GGGGATGGTG TGAAGTCTGC AACCACAAAG CTTCACAGAG CATTAGATGA AATGGTGAAA GAGCTAAAGC TTGCAGGCTA TGTTCCTGAT ACATCAATGG TGGTTCACGC TGATATGAGT GACAAAGAGA AGGAGATTAC GCTTAGGTAT CACAGCGAGA AGCTTGCGAT AGCATTTGGG TTATTGAATA CTCCTCCGGG AACAACGATT CGGGTTGTGA AGAATCTTAG GGTGTGTAGA GATTGCCACA ATGCAGCTAA GTTGATCTCT CTAATATTTG GTAGGAAAGT TGTTCTCAGA GATGTTCAAA GGTTTCATCA TTTTGAAGAT GGTAAATGTT CTTGTAGGGA TTTTTGGTGA CGTCACTCCA GACCAACAAC ATAATTTTCC GTAGCTAAAA ATTTCTTATA GTTTTATGCA TTGATTCAAA A |
| Length | 1951 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 1477323.. 1479286 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G02980.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | Encodes a chloroplast RNA editing factor. |
| Alias | [OTP85][ORGANELLE TRANSCRIPT PROCESSING 85] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg474241 | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases |
| 7.4162 |
Ahg321462 | actin 1 |
| 15.906 |
Ahg932553 | Protein of unknown function (DUF295) |
| 20.3961 |
Ahg474076 | cytochrome c biogenesis protein family |
| 31.241 |
Ahg491552 | proton gradient regulation 3 |
| 43.1277 |
Ahg949546 | chloroplast RNA-binding protein 31B |
| 54.2494 |
Ahg928561 | Pentatricopeptide repeat (PPR) superfamily protein |
| 58.7878 |
Ahg946663 | dihydrolipoyl dehydrogenases |
| 64.622 |
Ahg946608 | YbaK/aminoacyl-tRNA synthetase-associated domain |
| 66.8132 |
Ahg920476 | Cobalamin biosynthesis CobW-like protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|