Detail


ID : Ahg484498

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484498|fgenesh2_kg.5__490__AT3G27150.1
Sequence
AGAGGGAATG TCAAAAGTGT ACTAGGCCGG GATTTTACAA AGACATGTTG ACGCTAGGAG AAGATCATAC GGGTAGAATT CGGGCAAGCT CGAGCCTGTC TAGGCCGAAG AAGCTTCGGG TTCGTGGCTA CGAGATTCCT GATCTAAACG TAGAACCTAG TTTGGATTGG GATGGGGAAG AAACAGGGGA GGCCACTCAG ACTCTGAGCA GTACCTGTTT GAGATCTCAG GATGCAGATT ATTGTTTACT AAATGTTCCT CAGCTCGTTT ACGAGCTAGA GGTTGAGATA CTTGCACGCG TGCCGCGTTT CGAGTATTGG AAACTAAAGT TACTTAATAA AGGGTTTTCG AGTTTGCTAA AGAGCGATGA AATTTTCAAG GTGAGACGAG AACGGGGTGT AGTTGAACCG TCTGTCTTTA TGCTGTCGAG CGGTGATATG CGTTGGACGA TGTTTGATAA GGGCTTTGAG AATTTTCAGA AGCTTCCGGA ACTTCCTTCT GACATATGCT TCCTCCATGG AGATAAAGAG TCGCTTTGCG CAGGAACTCA TTTGATTGTC ACTGGGAAAG AAGAGAAGAG CATAGCCCTA TGGCGGTATG TGCTGGAGAC AAGTAAATGG TTCAAAGGTC CTGCAATGAT CACACCACGA ATCTTGTTTG CTTCTGCTAC TTGTGGGACT GTTGTGTTTG TAGCTGGTGG GTTGAAAATT GAAGGAAACG GGACCATGGA AGTTGTGGAC AGCGTCGAGA AGTATGACTC TAAGACCAAA ACGTGGACGC TTCTCCGCGG AATGCATAAG CGGCGGAAGT TCTGCTCCGG GTGTTACTTG CGTGGCAGGT TTTACGTACT TGGAGGCCGG GATGAGAATG GTCAAAACCT AACTTGCGGA GAAAGTTACG ACGAGAAGAC AGACACATGG GAACTAATAC CGGACATTCT CAAAGACATG TCTTTCTCTT CTGTCCAATC TCCGCCCCTC ATTGCGGTGG TTGGGGATGA TCTTTACTCG TTGGAAACCT CGGCAAACGA GCTTCGCGTT TATGATGCAA AGGCAAACGC CTGGAAGAAG CTTGGAGATG TTCCCGTGAG AGCTAAGTCT AATGGAGGAT GGGGAGTAGC GTTTAAGTCG CTTGGAGACA AGCTGCTTGT GATTGGAGCA TCAGCGGGTC CGTCTAGGGC CGAGACAATG TCGGTTTACA TGTGCCGTCC ATCTGCTGTT CCTGAGAACA AGCTGTATTG GGAGGAGTCT AAACGCTGCT GTGGCGTTAG GCTCAACCAT TTTATCCTAA ACTGTTGTGT AATGATTGCT TAAGGGTCTT CTCTAAGAGA ACTTGTGGTT TTGTGTGTGA GACTGAATAA AACGCTGTGC TATTGTGGGT TATCTTCCGA TTCAGCGTTT GCATCTTCAC TTTTTGGTGA ACGCTGGTGA TTGCTCATTT TGTGATATAT CTATCTTAAG CTTTTGTAAG ATTGTGTTAA AAATAAAAAG GTTATTTATA TCTGAATAAT TCGAAACAAT CTG
Length1523
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3219000.. 3220573
Download Sequence
A.thaliana
AGI-codeAT3G27150.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summaryTarget gene of MIR2111-5p.
Alias
Gene coexpression
MR
MR Locus Description
16.0624 Ahg934176
23.3666 Ahg496112 myb domain protein 59
24 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
34.8138 Ahg337666 cellulose synthase like E1
36.2491 Ahg492886 phloem protein 2-A1
44.3847 Ahg948913 thioredoxin 3
45.5522 Ahg493510 Rapid alkalinization factor (RALF) family protein
50.6162 Ahg929332 metallothionein 3
51.4393 Ahg493559
51.614 Ahg490488 TRAF-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression