Detail



ID : Ahg484500

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484500|fgenesh2_kg.5__492__AT3G27170.1
Sequence
CCACCCAGAA GTGGTTTGTT AACAGAGAAA GCTCTATAAG AACCTTAAAA AGTTCTGTTG CAGAGGTTCC GACCAAAAGC CAGAGTTTCA TCTTTATGTG ATCAGAGACA GAGATGGTGG AAGAAGATTT AAACCAGATT GGTGGCAATA GTAATTACAA TGGAGAAGCA GACCCAGAGA GCAACACACT TAACCAACCT CTGGTTAAGG CTAATCGAAC ACTTTCTTCA ACTCCTCTTG CCTTGGTTGG TGCCAAGGTT TCCCATATCG AAAGCTTGGA CTATGAAATA AACGAAAACG ATCTGTTTAA GCATGATTGG AGAAAAAGAT CAAAGGCACA AGTACTTCAA TACGTGTTCC TGAAATGGAC GTTAGCTTGT CTTGTTGGTC TTTTCACTGG TTTAATCGCT ACTCTCATCA ACTTAGCTGT TGAAAACATC GCCGGCTACA AGCTTTTAGC CGTTGGTCAC TTCCTCACCC AAGAAAGATA TGTTACAGGT CTGATGGTGC TTGCTGGGGC GAATTTGGGA CTGACGTTGG TGGCGTCTGT GCTTTGTGTT TGCTTTGCTC CTACCGCGGC TGGACCTGGA ATTCCTGAGA TCAAAGCTTA TCTTAATGGC GTTGATACTC CCAACATGTT TGGTGCTACT ACTATGATCG TTAAGATTGT TGGAAGCATT GGAGCGGTTG CAGCTGGACT TGATCTGGGT AAAGAGGGTC CTCTGGTTCA CATTGGAAGC TGCATAGCTT CTTTGCTTGG ACAAGGCGGA ACAGACAACC ACCGTATCAA GTGGCGATGG CTTCGTTACT TCAACAACGA TAGAGACCGC AGGGATCTGA TTACATGTGG TTCAGCTGCT GGAGTCTGTG CAGCCTTCAG GTCACCTGTT GGAGGTGTGC TTTTCGCCCT TGAGGAAGTG GCCACTTGGT GGAGAAGCGC CTTATTGTGG CGGACTTTCT TCAGTACAGC GGTCGTTGTG GTGGTTCTAA GAGAGTTCAT AGAGATCTGC AATTCAGGGA AGTGTGGGTT GTTTGGAAAA GGAGGTCTTA TCATGTTTGA TGTGAGTCAC GTAACTTATA CTTACCATGT AACTGACATA ATCCCTGTCA TGTTGATTGG TGTAATCGGT GGAATTCTTG GGAGCCTCTA TAATCACTTC CTGCATAAAG TTCTCCGGCT TTACAATCTC ATCAACGAGA AGGGTAAGAT CCACAAGGTG CTTCTCAGTC TTACAGTATC ACTCTTCACA TCGGTTTGCC TTTACGGTCT TCCTTTCCTC GCGAAATGCA AGCCTTGTGA CCCCTCGATA GATGAGATCT GCCCGACCAA TGGAAGATCG GGAAACTTCA AACAGTTCAA CTGCCCAAAA GGTTACTACA ATGATTTAGC TACTCTGCTT CTCACCACCA ACGATGACGC TGTCAGAAAC CTTTTCTCTT CCAACACCCC CAATGAGTTT GGCATGGGTT CCCTGTGGAT ATTCTTTGTG CTCTACTGCA TCTTGGGGCT TTTCACATTT GGAATTGCAA CACCGTCTGG TCTCTTCCTT CCCATCATCC TCATGGGTGC TGCATATGGC CGAATGCTTG GCGCTGCGAT GGGATCCTAC ACAAGTATTG ACCAAGGGCT TTATGCTGTC CTTGGTGCAG CTGCACTCAT GGCTGGATCG ATGAGAATGA CTGTGTCACT CTGTGTTATA TTCCTCGAAC TCACCAACAA CCTTCTTTTG CTTCCCATTA CAATGATTGT GCTTCTGATT GCCAAAACTG TGGGAGACAG CTTCAACCCA AGTATCTATG ACATCATCTT GCATCTAAAG GGCTTACCTT TCTTAGAAGC AAATCCAGAG CCGTGGATGA GGAACCTCAG TGTTGGTGAG CTTGGTGATG CTAAGCCCCC GGTTGTAACC CTGCAAGGCG TAGAAAAGGT TTCAAAAATA GTTGATGTGC TAAAGAACAC GACCCATAAT GCATTCCCTG TTTTAGATAA AGCAGAAGTA CCTCAAGTGG GTCTACCAAC TGGTGCTACA GAACTCCACG GGTTGATCCT GAGAGCGCAC CTCGTTAAAG TTCTGAAAAA GAGATGGTTC TTGACAGAGA AAAGAAGAAC AGAAGAGTGG GAGGTCAGGG AGAAGTTTCC ATGGGATGAA TTGGCTGAGA GAGAAGACAA CTTTGACGAC GTGGCCATCA CAAGCGCTGA AATGGAAATG TATGTCGATC TTCATCCTCT TACCAACACA ACACCTTACA CAGTCATGGA GAACATGTCT GTGGCCAAGG CTTTAGTACT ATTCCGGCAA GTGGGACTCC GGCATTTGCT TATTGTTCCC AAGATTCAAG CCTCGGGAAT GTGTCCTGTG GTAGGGATCT TAACCAGGCA GGATCTAAGG GCATACAACA TTCTACAAGC CTTTCCTCTA TTGGAAAAAT CCAAAAGTGG AAAAGCACAT TGAAGAGCTA CTTACTTTGT TGTAAAATAT CGCTTGCAGC CTTGTGTTTT TCTTCTCATT CTTGAAGATG TATCTGTCCA GTTTTGCACT TCTTCTTCAT ATCCAACAGA AGTTGATAAG ATAAATATTG CAATGACACA AAAAAGAGAG AACCATATCG CGTTATCAAC AGGAACAGAG CAAAACTGTT TTCTCATCTA TTAGATGGTC TCCTAAACTT CTGAAGTTCA AGTGTTACAG ACATTAACTA ATGAGATTCT TGTGA 
Length2715
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3246943.. 3250160
Download Sequence
A.thaliana
AGI-codeAT3G27170.1
Descriptionchloride channel B
TAIR curator summarymember of Anion channel protein family
Alias[ATCLC-B][CLC-B][chloride channel B]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg482180 cellulose synthase-like B4
5.74456 Ahg470572 Uridine diphosphate glycosyltransferase 74E2
7.14143 Ahg489859 Sucrose-phosphate synthase family protein
8.12404 Ahg493689 Homeodomain-like superfamily protein
8.24621 Ahg493346 ERD (early-responsive to dehydration stress) family protein
9.21954 Ahg496108 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
15.4919 Ahg496512 Radical SAM superfamily protein
16.7033 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
17.2047 Ahg940830 elongation factor family protein
17.2337 Ahg473685 TCP family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression