| Annotation |
|---|
| Description | jgi|Araly1|484581|fgenesh2_kg.5__573__AT3G27925.1 |
| Sequence |
AATGGCGACG ACGACGAGTT GTTCGCTTCT CCTTTCTTCT ACTCTCTTCC TTCACTCTCC TCCTTCTTCT CAACTCTCCT TCTTCAACCT CTCTTCTTCA CGATCCTCTC CAATTTCTCT CTACCCAATC CGATCCAAAC GCTATTTCCG AATTCTCTCG AAGCTTCCAC TAAACGACAA CAACAACGAT GATGATACTC TTCTTCTTCC TCCGTTCTCC GCCGTTAAGC CTTTCTTCCT CCTCTGTACC TCCGTCGCGT TATCGTTCTC ACTATTCGCC GCTTCTCCTT CTTCGGCGTT TGTAGTCAGT ACTCCGAGGA AACTTCAAAC TGATGAGCTC GCCACTGTTC GTTTGTTTCA AGAGAATACT CCTTCCGTTG TTTACATCAC TAATCTCGCC GTCAGGCAGG ACGCGTTTAC ATTGGATGTT CTTGAGGTAC CACAAGGCTC TGGTTCAGGA TTTGTGTGGG ATAAGCAAGG TCACATTGTT ACCAATTATC ATGTTATTCG TGGTGCTTCT GATCTCAGGG TGACTCTTGC TGATCAAACA ACATTTGATG CAAAAGTTGT TGGATTTGAT CAAGATAAGG ATGTTGCGGT TCTACGTATT GATGCGCCGA AAAACAAATT AAGACCTATA CCGATTGGAG TCTCTGCGGA TCTTCTTGTT GGCCAGAAAG TCTTTGCCAT TGGCAATCCT TTTGGACTTG ATCATACTCT CACAACTGGT GTTATTAGTG GTTTACGAAG AGAAATTAGT TCTGCTGCAA CTGGTCGTCC AATTCAAGAT GTGATACAGA CAGATGCTGC TATTAACCCT GGTAATAGTG GAGGACCTCT TCTAGATAGT TCAGGAACGC TAATTGGTAT AAACACAGCC ATTTATTCTC CTTCTGGTGC ATCTTCTGGA GTGGGCTTTT CGATCCCAGT TGACACCGTT GGTGGTATCG TTGATCAGCT GGTGAGATTT GGTAAAGTCA CAAGACCAAT CTTAGGTATC AAATTCGCGC CGGACCAATC TGTTGAACAA TTGGGAGTGA GTGGTGTGCT CGTCTTGGAT GCTCCTCCAA GTGGTCCAGC CGGGAAAGCC GGACTTCAGT CAACGAAACG TGACGGTTAC GGGAGACTAA TACTAGGAGA CATAATCACG TCAGTGAACG GTACAAAAGT CTCTAACGGG AGTGATCTGT ACCGGATTCT CGATCAATGC AAAGTCGGCG ATGAGGTGAC CGTAGAGGTT CTAAGAGGCG ATCACAAGGA GAAAATCTCT GTAACTCTCG AACCAAAACC GGACGAGTCT TAGAAACGTC GTTGAAAGAA GTAAATATAT AACGTGTAGA AAAAAAAGTC CGGTGGGT |
| Length | 1358 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 3940553.. 3942792 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G27925.1 |
| Description | DegP protease 1 |
| TAIR curator summary | Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition. |
| Alias | [DEG1][DEGP1][degradation of periplasmic proteins 1][DegP protease 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.65685 |
Ahg949748 | GroES-like zinc-binding alcohol dehydrogenase family protein |
| 9.79796 |
Ahg480941 | Protein of unknown function (DUF3353) |
| 11.225 |
Ahg481209 | |
| 11.4018 |
Ahg474411 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| 13.4164 |
Ahg481547 | soluble epoxide hydrolase |
| 13.7113 |
Ahg495050 | alpha/beta-Hydrolases superfamily protein |
| 14.2829 |
Ahg315482 | Protein kinase superfamily protein |
| 15.4919 |
Ahg481487 | CTC-interacting domain 7 |
| 17.3205 |
Ahg484044 | ABC-2 type transporter family protein |
| 19.4422 |
Ahg929332 | metallothionein 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|