| Annotation |
|---|
| Description | jgi|Araly1|484760|fgenesh2_kg.5__752__AT3G33520.1 |
| Sequence |
CGGCGGCGAG TGATCGTCAC CAATGTCAAA CATCGTGGTT CTAGATAACG GCGGCGGTCT AATCAAAGCC GGACAAGGCG GCGAGCGTGA TCCCACCACC GTAATCCCAA ACTGTCTCTA CAAACCTCTC TCCTCCAAGA AATTCCTCCA CCCATCACCA CTCACCAGTC TCTCCGACGA AATCGACCTC ACCTCCGCCG CCGTACGCCG CCCAATCGAC CGTGGCTACC TCATAAACTC CGATTTACAA CGCGAAATCT GGTCACACCT ATTCACTTCT TTCCTCCACA TCACTCCTTC CTCCTCCTCT CTCCTCCTCA CCGAAGCACC ACTCTCAATC CCTTCCGTTC AACGAACCAC CGACGAGCTC GTCTTCGAAG ATTTCGGATT CTCTTCTCTC TATGTAGCTC ATCCTCAATC TCTTGTTCAT CTCTATGAAG CTAGTCGTCA GCCTGATTCA ATCCTCTCAA AGACTCAGTG TAGTCTCGTT GTTGATTGTG GTTTCTCCTT CACTCACGCT GTTCCTGTTC TTCACAATTT CACTCTTAAT CACGCCATTA AGAGGATTGA TTTAGGAGGA AAAGCTTTTA CTAATTACTT GAAGGAATTG GTGTCTTATA GATCTATCAA TGTTATGGAT GAAACGTTTT TAGTTGATGA TGCTAAGGAG AAGCTTTGTT TTGTTTCACT TGATCTTCTT CGCGATCTCC GCCTTGCTCG AAATGGAAAC AATCTTATCA AGTCTACTTA TGTTCTTCCT GATGGTGTTA CACATACCAA AGGTTATGTT AAAGACCCTC AAGCTGCTAA GAGGTTTCTT AGTTTGTCAG AGAAAGAGCA TGTGGTGATG GATAAGGTTG GGGAGAGGAG GAAGGCTGAC ATGAACAAAA ACGAGATTGA CTTAACGAAT GAGCGTTTTC TTGTACCTGA GACGTTATTC CAGCCTGCGG ATCTAGGGAT GAATCAGGCG GGACTTGCAG AATGCATTGT CCGAGCTATA AACTCATGCC ATTCTTACTT GCAACCAGTT TTGTATCAAA GCATCATCTT AACTGGTGGA AGCACATTAT TTCCACAACT TAAGGAGAGA CTAGAAGGAG AGCTGCGACC ACTTGTCCCC GATCACTTTG ATGTGAAGAT AACAACTCAG GAGGACCCCA TACTAGGTGT ATGGAGAGGT GGTTCACTTT TGGCTTCGAG CCCGGATTTT GAGTCCATGT GTGTCACCAA GGCTGAGTAC GAAGAGCTTG GATCAGCTCG GTGTCGTAGA AGATTCTTTC ATTGAGGCTA ACCAAAACAA TATCAAATGA GTTGGTTGTA AGTTGTAATT CTTCACATTA TGTGTCGAAT ATCGTAATGC ATG |
| Length | 1363 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 8953744.. 8955504 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G33520.1 |
| Description | actin-related protein 6 |
| TAIR curator summary | Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature. |
| Alias | [ARP6][ATARP6][ESD1][SUF3][actin-related protein 6][EARLY IN SHORT DAYS 1][SUPPRESSOR OF FRI 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.74597 |
Ahg943403 | C2H2 and C2HC zinc fingers superfamily protein |
| 10.0995 |
Ahg481704 | ABC-2 type transporter family protein |
| 12.5698 |
Ahg342721 | |
| 13.8564 |
Ahg473716 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 16.9706 |
Ahg471307 | CYTOCHROME P450 51G1 |
| 24.8193 |
Ahg924525 | 6-phosphogluconate dehydrogenase family protein |
| 25.0998 |
Ahg485877 | Peptidase M28 family protein |
| 25.9808 |
Ahg495124 | SUMO-activating enzyme 1B |
| 26.4953 |
Ahg934539 | CAX-interacting protein 2 |
| 27.1109 |
Ahg479514 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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