Detail



ID : Ahg484792

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484792|fgenesh2_kg.5__784__AT3G43230.1
Sequence
GAATAAAATA TTCCCCGGCG CCGTGTTCTT GGTCGCTACT TATCTTCTTC TTCAATCCCA TAAATCGGAA TTGCTATTTT TCTTAACCTA ATTCGTTTCT TCGCGATCAA AGCACAGGTT TTTCAATTTT AGTGAATTTT CAATTTTAAG GCATGGCTAC TCTCAACGGA AAAGTTTCTC CGTATTCTGA AGAAAACATC AAATTCAAGT ATGATGATTA TGATGATGAT GATGATGATG ATGGTTATGG AGATGGACCT AAATGGTCTG TTCAATCAAA CCCCACAAAG AAGGAACCGG AGTATCCGAT TATCGACTCT GGAGATTATG TTGATGACGG ATATGATTCA GCTGACGAGC TCTCTACGAC GCCGATTCAA GGAAATGGTA AACCTGAAGT AAACTTGAAA AACGTTTTAA CTGGGTTGAT TGCTATTGTT ACCGGGCGGA ACAAGGACGT AAGGGGTTCG TTAGATCAGA AAATCCCGTC TTCGAATGTT TCGTTTCTTG GCTCTGGCAA GAACGGAGAT ACTTATGTTC ACTCGTCTGT TTACATACCG AGTGCTCCGC CTCTACTTGA ACCTAGTGGG ATTAATTACA GTGTTTACAA GGAGTTGCTT GAAGCTGAAC CTCCTGAGTG GCTACCTGAT AGTTTAGCTA CTACTTGCAT GCAGTGTTCT ACTCCTTTTA CTGCAATCAC GTGCGGTAGA CATCATTGTC GGTTCTGCGG AGGGATATTT TGTAGGAACT GTTCGAAAGG GAGGTGTTTG ATGCCTAGTC GGTTTCGGGA AAGGAATCCT CAGAGAGTGT GTGATTCTTG CTACGAGAGG CTTGATCCTT TGCAATGTGT TCTTATTAAC TCTATTAGTA ATGCTATGCA AGTAGCCAAG CATGATGTTG TGGATTGGAC TTGCTCAAGA GGATGGTTGA ATCTCCCTGT TGGTCTATCC ATGGAAGATG AGATATACAA GGCATCTAAT ACGTTGAGAG GTTACTGCCA GGTTGCAAGA CTAGACCCTG AGAAATCCAT ACCGCATGCA GTTCTTAGTC GAGCTAAAGG TTTGGCAATC ATAACGGTTG CTAAGGCTGG GGTTTTACTG TCATACAAAC TCGGGACTGG TCTGGTAATA TCTCGGAGAC CAGACGGGTC ATGGTCTGCT CCATCTGCCA TACTATCAGT AGGTCTTGGA TGGGGTGCTC AGATTGGAGG TGAGTTGATG GACTTCATAA TAGTGCTGCA TGATGTGAAA GCGGTGAAGA CGTTCTGCAG CAGAATGCAT TTCTCTCTAG GCGCGGGATG CAGTGCAGCA GCAGGACCTA TCGGGAGAGT GCTGGAAGCT GACCTTCGTG CTGGTGACAA AGGCTCTGGT GTCTGCTATA CTTACAGCCG TAGCAAAGGG GCATTTGTGG GAGTATCTCT TGAAGGAAAT GTGGTGGCCA CACGAAGGGA CATGAATGTA AAGTTCTATG GCGATCCATA CCTAACCACA ACAGACATTC TACTTGGGAT GGTGGATCAA CCGAAGGCAG CTGCACCGTT GTACACTGCC CTCAGGGACC TCTATGCTCG GTTGCGCCCA TAATCTCCAT TCACATTACA AACTACTCTT TGTATATAAA CGCTTCTCAA ATTCGTTACT ATTTAAGTGT ACATGTACAT AAATTGTTTC TTGTGAACGA TTTGGGATTT ATTCATTTTA TCAAAGCTTG TTTACCTTTT TTAA 
Length1724
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9551152.. 9553460
Download Sequence
A.thaliana
AGI-codeAT3G43230.1
DescriptionRING/FYVE/PHD-type zinc finger family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg495726 Pyruvate kinase family protein
13.1909 Ahg474651 ubiquitin-protein ligase 1
14.4914 Ahg927169 Ribonuclease II/R family protein
16.5831 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
18.4932 Ahg491165 xanthine dehydrogenase 1
20.3961 Ahg912447 Family of unknown function (DUF572)
23.2164 Ahg472928 histidine kinase 3
29.7825 Ahg497058 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
32.4037 Ahg933488 PHF5-like protein
33.4963 Ahg918881 Cysteine proteinases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression