Detail



ID : Ahg484895

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484895|fgenesh2_kg.5__887__AT3G45010.1
Sequence
AAAAAAATGG ACTCCAAAAC AACTTTTCTC ACATTTGTTC TCTGTATTTC CATTTTCTCT CATTTTTCAC CCTCAAGTTC CAAATCTATC ACAGAAAAGC CTTTATCTTT CTCACCGTCG GCGAGTTTGC CGACTCTCAC GGCGGAGAGA CTAATCAAAG GATTCAATTT GATGCCTACA CGTGACGTGA ATGTCATCGA TGAAGACGGT TCTGAGGCTC CGAGGCTAGT CGAGAGAGAA TTCGATTTGC CGGCGGAGGT TGACCGTCGT GGCTCCGGTG GTACTCCGTC GGTTCAAGAT TTTGGTCACC ATGCTGGTTA CTACAAACTC CCTAATTCAA AAGCAGCCAG GATGTTCTAC TTTTTCTTCG AGTCAAGGAC TAACAAAGCC GATCCAGTGG TCATTTGGCT AACTGGTGGA CCTGGTTGCA GTAGTGAACT GGCTCTGTTC TACGAGAACG GACCGTTCAC CGTCTCCAAC AACTCATCTC TTTCTTGGAA CGAATTTGGT TGGGACAAGG CATCGAATCT AATCTACGTG GACCAACCGG TTGGAACCGG TTTCAGTTAC ACATCTGACC AAAGCGATCT TCGACACGAC GAGGATGGTG TCAGTAATGA CCTTTACGAC TTCTTACAGG CTTTTTTCAA AGAGCATCCA CAATTTGTGA AGAATGACTT TTACATCACC GGTGAATCCT ATGCCGGACA TTACATTCCG GCATTGGCTT CACGGGTTCA CCGTGGTAAC AAGAACAAAG AAGGAACTCA CATTAACCTT AAGGGTTTTG CAATCGGTAA CGGTTTGACC AACCCGGAGA TTCAATATGG TGCTTATGCG GATTATGCGC TAGACATGAA GTTGATAACA CAGTCTGATC ACGATAACCT TAACCGTAAC TACGCAACTT GTCAACAATC CATCAAAGAA TGCAGCGCGG ATGGTGGGGA AGGTGATGCT TGTGCTTCTT CTTACGTTGT CTGCAACAAC ATTTTCCAAA AGATTATGGA TATTGCAGGA AACGTAAACT ATTACGACGT GAGGAAACAA TGTGAAGGAA GCTTGTGCTA TGATTTCTCG AACATGGAGA AGTTCTTGAA CCAGAAATCG GTACGGAAGG CATTAGGTGT GGGAGATATC GAGTTTGTGT CTTGTAGTAC AGCGGTTTAC GACGCAATGC AGATGGACTG GATGCGGAAT CTTGAGGTCG GGATTCCAGC TCTTCTTCAA GATGGAATTA AGCTCCTTGT TTACGCCGGG GAATACGATC TCATCTGCAA TTGGCTCGGA AATTCGAAGT GGGTTCACGA GATGGAATGG TCAGGCCAGA AACAGTTTGT AGCAGCCGCG ACAGTTCCCT TCCTCGTAGA CAACAAAGAA GCCGGTTTGA TGAAGAACTA CGGTTCACTT ACTTTCCTCA AGGTCCATGA TGCTGGACAC ATGGTTCCAA TGGATCAGCC AAAGGCAGCA TTGCAAATGC TTCAAAACTG GATGCAAGGA AAGCTCAGTA CACCCACTGG TCGGACCGCT CATCAGTAAA TCCAAATTCA GAACCGACTG AATTATTATG TATTTAGGAG ATCAATACTT TACTTTTAAG AAAGCTAAAT AACATATACT TGTGAATTAT TTCTATAAAT ACACAGGAAA CTTCATTGTT AATCTCTAAC CATCAT 
Length1676
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11077617.. 11080303
Download Sequence
A.thaliana
AGI-codeAT3G45010.1
Descriptionserine carboxypeptidase-like 48
TAIR curator summary
Alias[scpl48][serine carboxypeptidase-like 48]
Gene coexpression
MR
MR Locus Description
14.1067 Ahg473866 Granulin repeat cysteine protease family protein
20.2485 Ahg475262 NAD(P)-linked oxidoreductase superfamily protein
22.4499 Ahg896727 nodulin MtN21 /EamA-like transporter family protein
32.0312 Ahg947863 Protein of unknown function (DUF1997)
43.795 Ahg479690 MATE efflux family protein
54.6626 Ahg476076 NAC-like, activated by AP3/PI
58.1722 Ahg480836 H(+)-ATPase 1
58.3609 Ahg343993 alpha/beta-Hydrolases superfamily protein
59.4727 Ahg935089 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
61.6117 Ahg494063 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression