Detail


ID : Ahg485016

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485016|fgenesh2_kg.5__1008__AT3G46440.1
Sequence
TTTTCCAGAT AATATATTCA AAATTTTACA GAGGAAGAAG AAGAAGTTCC GACACTTGTG AGAGACTATT TATTCGCTCT CTTCAGATCA CAAAGTTTTC GTTTTTAGGG TTCTCTCATC GATCTCGTAT TCTTCCTCTC TCTCTCATCA ATGGCGTCAA GTGATAAACA AACAAGCCCA AAGCCTCCTC CTTCTCCTTC TCCTCTCCGT AATTCCAAGT TTTGTCAGTC AAATATGAGG ATCTTGATCT CAGGAGGAGC TGGATTCATT GGCTCTCACC TTGTTGATAA GTTGATGGAA AACGAAAAGA ATGAGGTGAT TGTTGCTGAT AACTATTTCA CCGGTTCAAA GGACAACCTT AAGAAGTGGA TCGGTCATCC GAGATTTGAG CTTATCCGTC ACGATGTCAC GGAGCCACTT TTGATCGAGG TTGATCAGAT TTACCATCTC GCATGTCCTG CTTCTCCCAT TTTCTACAAG TATAACCCTG TGAAGACAAT CAAGACAAAT GTGATTGGCA CACTGAACAT GCTAGGTCTC GCCAAGCGTG TTGGAGCAAG GATTTTGCTT ACCTCAACCT CGGAAGTGTA TGGAGATCCT CTCATCCATC CCCAGCCTGA GAGCTATTGG GGAAATGTCA ACCCAATTGG TGTTAGGAGC TGTTATGATG AAGGCAAGCG TGTAGCTGAG ACCTTGATGT TTGACTACCA TAGGCAGCAT GGAATTGAAA TCCGCATTGC CAGAATCTTC AACACTTATG GTCCACGCAT GAACATTGAT GATGGCCGTG TTGTAAGCAA CTTCATTGCA CAAGCACTCC GTGGTGAGGC ATTGACTGTT CAGAAACCAG GGACACAGAC ACGCAGTTTC TGTTATGTAT CTGACATGGT TGATGGACTT ATGCGCCTCA TGGAAGGAGA TGACACTGGT CCCATCAACA TCGGTAACCC AGGTGAGTTT ACCATGGTGG AACTTGCTGA GACAGTGAAG GAGCTGATTA ACCCGAGCAT AGAGATAAAG ATGGTTGAGA ACACACCGGA TGATCCAAGA CAGAGGAAGC CGGACATCAC AAAGGCTAAA GAAGTGTTGG GATGGGAACC AAAGGTGAAG CTTCGTGAAG GCCTTCCCCT TATGGAAGAA GACTTCAGGC TAAGGCTCGG AGTCCCCAAG AACTAAAACT CTGTCAGAAT GCACTATCAG TCAGTTCTAC TTTTCAAAAT TCCATGGTGC AATTGGTTGG TTTCATATAA TATGTTTCTC ATACTTTCCA CAGTTATATT GTCCCTAGAG AAAAATAAAG ATTATGAACG AATGCTTTT
Length1319
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11999005.. 12001733
Download Sequence
A.thaliana
AGI-codeAT3G46440.1
DescriptionUDP-XYL synthase 5
TAIR curator summaryencodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
Alias[UXS5][UDP-XYL synthase 5]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg949638 nucleotide binding protein 35
8.83176 Ahg897421
14.4222 Ahg487672 alpha-galactosidase 1
15.8114 Ahg490342 sucrose synthase 3
20.567 Ahg482625 Aldolase superfamily protein
23.5797 Ahg495767 serine acetyltransferase 1;1
26.0384 Ahg489982 glutathione peroxidase 6
26.9815 Ahg355042 pleckstrin homology (PH) domain-containing protein
27.4955 Ahg478172 ubiquitin-conjugating enzyme 11
27.4955 Ahg496351
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression