Detail



ID : Ahg485345

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485345|fgenesh2_kg.5__1337__AT3G49850.1
Sequence
AAAGGTCAAG TTTTTGTGTC TTCTTTCAAA ATTTGATCCA TGTCACTCTC CATAGCTTCC TCTCTCATTC TCTTCAGCGT TATCAGAGAA TTGAAGTCGA GACATTAGAA GTTTTGTTGT TGTGTTTCTG GAGAAGTTTT GAATTTTGTG ATAAAATTGT GTCAATGGGA GCTCCAAAGC AAAAGTGGAC ACCAGAAGAA GAAACAGCTC TTAAAGCTGG AGTGCTTAAA CATGGAACTG GAAAATGGCG TACCATTCTC TCAGATCCTG AGTATAGCTC AATTTTGAAG TCTCGTTCCA ATGTGGATCT CAAGGACAAA TGGAGAAATA TAAGTGTAAC AGCTTTATGG GGATCTAGGA AGAAGGCTAA GCTAGCTCTT AAAAGAACTC CTTTGTTGGG TTCTAGGCAA GACGATAACG CTACAGCTAT TACCATTGTG TCTTTAGCTA ATGGTGATGG AGGAGGACAA CAGATTTATG CACCATCTCC TCCTGCAGGT TCTTGTGAAC CACCAAGACC TTCTACAAGT GTGGATAAGA TTATACTGGA GGCCATTACC AACTTGAAGA GACCGTTTGG TCCTGACGGG AAGTCGATCT TGATGTATAT AGAGGAGAAT TTCAAGATGC AACCAGATAT GAAACGGCTT GTGACGTCAA GACTAAAGTA TTTGACAAAT GTTGGAACAT TAGTTAAGAA AAAGCACAAA TACAGGATTT CTCCGAATTA CATGGCTGAA GCAGCAAGAC AAAGGTCTCC TCAACTCTTA TTGGAAGGAA ACAAGGAAAA TACTCCGAAA CCCGAGGAGA ATGGCGTCAA AAATCTTATG ATAATGGGTA TGACAGAAAA AGAAGCTGCT GCAGCCGCTG CAAGAGCCGT GGCAGAAGCA GAATTCGCAA TCGCAGAAGC TGAAGAAGCA GCAAGAGAGG CAGATGAAGC AGAAGCCAAA GCTGAAGCTG CCCATATATT TGCAAAAGCG GCGATGAAAT CTTTGAAGTA TAGGATGCAT AGCCAAACTC GGTAAGAATT AAGAAAAATC GTTGATGTTG TATCGGTTGA TATTATCGTT TTGATATATC TTCATGTGAT CTTCATCTAA AGCAATATTT TACAATCGCT GCAGTGTTTT TGTTCAGTAA CAGTGTCTTC TAACTCAGAT AATCATTTAA AACCTGTTCC TTTTCTTGTT TCTGTTGATC TGGTTTTGTT AGTAACTTTT TGAAACTGGT TTGAAGAGAT ATAAATAAAG CCTTTGATT 
Length1259
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13985646.. 13987586
Download Sequence
A.thaliana
AGI-codeAT3G49850.1
Descriptiontelomere repeat binding factor 3
TAIR curator summaryEncodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.
Alias[ATTRB3][TBP2][TRB3][TELOMERE-BINDING PROTEIN 2][telomere repeat binding factor 3]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg940006 RP non-ATPase subunit 8A
7.61577 Ahg476277 Pentatricopeptide repeat (PPR-like) superfamily protein
8.66025 Ahg893389 Alg9-like mannosyltransferase family
9.53939 Ahg942359 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein
14.6969 Ahg472002 NAD(P)-binding Rossmann-fold superfamily protein
19.975 Ahg891006 Homeodomain-like superfamily protein
24.8998 Ahg931448 casein kinase I-like 5
28.6356 Ahg475254 Clathrin adaptor complexes medium subunit family protein
31.225 Ahg936010 Protein of unknown function (DUF1664)
34.1174 Ahg944513 Class I glutamine amidotransferase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression