Detail



ID : Ahg485512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485512|fgenesh2_kg.5__1504__AT3G51600.1
Sequence
ACCTTCTACT TTCATGCATT TGGGCTCTTC GCTCTCTCTA TATAAAACCC AACCTTCATT ACCATTAATC ATCATCCAAT CCAAAAAAGA GAAACAAAAA GTTTAAAGAT ATGGAGGGAC TCTTGAAGTT GTCAACGTTG GTGATTGTGT GCATGTTAGT GACCGCTCCA ATGGCGTCCG AGGCAGCCAT CTCATGCGGC GCAGTCACCG GCAGCTTGGG TCAATGCTAT AACTACTTGA TCCGAGGCGG TTTCATTCCT CGAGGGTGTT GCTCTGGCGT TCAGAGGCTC CACAGCATGG CTCGTACCAC CCGTGACCGA CAACAAGCTT GTCGTTGTAT CCAGGGAGCA GCTAGAGCCT TGGGTTCTCG ACTTAACGCT GGTCGTGCTG CTCGTCTCCC CGGTGCTTGC CGTGTTAGGA TCTCTTACCC CATCAGTGCC AGAACTAACT GTAACACCGT GAGGTGATCA AGAGGTGATA GACGCTGAAG GGTTTTCATA TAATCGATGA GAGAGTATTA AAATATAATT AAGATGTCAC TATATAAGAG TATATCCTTT TTACTGTTAT TGTTGCTGTG TTTTAGAATT TGTGTTTTCA TGCCTTTCTT TATATATGAC GACGGTCCAT TTAATTGGTC GTCTGTGTTG TGTACTCCTC TAATGATATA TGGAATTACG ATATATATAG TATGTATTAT TTTCAAAATC TTGCCA 
Length716
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14825169.. 14825986
Download Sequence
A.thaliana
AGI-codeAT3G51600.1
Descriptionlipid transfer protein 5
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
Alias[LTP5][lipid transfer protein 5]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg473259 Early-responsive to dehydration stress protein (ERD4)
8.24621 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
10.1489 Ahg930186 cell wall-plasma membrane linker protein
10.5357 Ahg485655 beta-galactosidase 2
13.6382 Ahg915730
14.7648 Ahg492197 cytokinin-responsive gata factor 1
15.2971 Ahg930849 glycine-rich protein 3 short isoform
16.4317 Ahg946934 3-hydroxyacyl-CoA dehydratase 1
17.8606 Ahg490053 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
18.4391 Ahg488319 carbonic anhydrase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression