| Annotation |
|---|
| Description | jgi|Araly1|485539|fgenesh2_kg.5__1531__AT3G51840.1 |
| Sequence |
GACGTAACCG GGTCGGATCC TTCTATCTCA TTATCACGAA GCCAAAGAAA TTTCTCCATC ACGATCATAG CCATGACGGT GCTTTCATCT GCAGATCGAG CTAGTACTGA GAAGAAGGTG AAGAGTTCAT ATTTTGATTT GCCGCCTATG GAAATGTCTG TAGCATTTCC TCAAGCAACT CCAGCTTCTA CATTTCCACC GTGCACTTCA GACTATTATC ATTTCAATGA TCTATTGACT CCGAAGGAAC AAGCCATCCG GAAGAAAGTG AGGGAATGCA TGGAGAAAGA AGTTGCCCCC ATAATGACAG AGTACTGGGA GAAAGCAGAA TTTCCATTCC ATATCACTCC AAAGCTTGGG GCTATGGGTG TTGCTGGTGG CTCGATTAAG GGTTATGGAT GTCCTGGCCT ATCCATCACC GCCAATGCAG TTGCCACTGC AGAAATAGCT AGAGTTGATG CAAGTTGTTC GACTTTCATT TTGGTGCATT CTTCTTTGGG CATGCTCACT ATTGCACTTT GTGGATCAGA AGCGCAGAAG GAGAAGTATT TACCTTCTTT GGCTCAATTG AATACCGTGG CTTGTTGGGC TTTGACAGAG CCCGACAATG GAAGCGATGC AAGTGGTCTA GGAACGACTG CCACAAAGGT TGAAGGAGGT TGGAAAATTA AGGGACAAAA GCGTTGGATT GGAAACAGCA CCTTTGCAGA TCTGTTGATC ATCTTTGCTA GGAATACAAC AACTAACCAA ATCAACGGAT TCATAGTCAA GAAAGATGCG CCTGGCCTAA AGGCTACTAA GATCCCAAAT AAAATAGGTT TACGTATGGT TCAAAATGGA GATATTCTAC TACAGAATGT CTTTGTTCCA GATGAGGATC GGTTACCTGG GGTAAATTCT TTTCAGGACA CCAGCAAGGT CCTGGCTGTC TCACGTGTAA TGGTTGCCTG GCAACCAATC GGCATATCCA TGGGAATCTA CGATATGTGT CACAGGTATC TGAAGGAGAG GAAACAGTTT GGAGCACCAT TGGCTGCTTT CCAGTTAAAC CAACAGAAGC TTGTGCAGAT GCTGGGTAAT GTTCAAGCGA TGTTCCTAAT GGGTTGGCGC CTCTGCAAGC TATATGAGAC GGGTCAGATG ACTCCAGGTC AAGCCAGTTT AGGAAAGGCA TGGATTACAT CGAAAGCGAG GGAAACTGCT TCGCTAGGTC GGGAATTACT TGGTGGGAAT GGAATTCTAG CAGATTTTCT GGTGGCAAAG GCATTCTGTG ACCTTGAACC TATTTACACA TACGAAGGGA CTTATGATAT AAACACCTTA GTAACAGGGA GGGAAGTAAC GGGTCTTGCG AGTTTCAAAC CGGCTACACG GAGCCGTCTC TAAGTTAAAA GGTTGTGCTG TGTTTGTTGT TACTGCTGGT TAGTATTGAT ATTGTAATGT GGGGTTTACA TCTACAAATC ACAAATGTGC CAAATAATCT GACCTTAAAA AATTTAGGGT CCAATGGGGG AATAATATCC ATTTGTTAAC GTTTT |
| Length | 1535 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 14945923.. 14949536 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G51840.1 |
| Description | acyl-CoA oxidase 4 |
| TAIR curator summary | Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis. |
| Alias | [ACX4][ATG6][ATSCX][acyl-CoA oxidase 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg479458 | PTEN 2 |
| 7.81025 |
Ahg472924 | |
| 8.48528 |
Ahg483191 | glutamate synthase 2 |
| 13.8564 |
Ahg317971 | ubiquitin-specific protease 13 |
| 18.4932 |
Ahg483447 | electron-transfer flavoprotein:ubiquinone oxidoreductase |
| 23.6432 |
Ahg483719 | DEA(D/H)-box RNA helicase family protein |
| 25.2389 |
Ahg946673 | response regulator 2 |
| 27.2029 |
Ahg488117 | RNA helicase family protein |
| 27.5681 |
Ahg494779 | Abscisic acid-responsive (TB2/DP1, HVA22) family protein |
| 27.9285 |
Ahg475455 | shaggy-like kinase 42 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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