Detail



ID : Ahg485541

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485541|fgenesh2_kg.5__1533__AT3G51860.1
Sequence
CAGATGTAGT AGAATCAAAA CGTACGTCTT AGAACTATGG GAAGTATCGT GGAGCCATGG GCAATCGCCG AGAACGGAAA CGCAAACGCG ACCGCAAAAG GGTTAAGCAG AGAGCTGCGA CATGGGAGAA CAGCACACAA CATGTCTTCA TCGTCGCTAA GAAAGAAATC AGACCTGAGA TTGATTCAGA AAGTTCCATG CAAAACTCTT AAGAACATTC TCTCCAATCT TCAAGAAGTC ATTCTTGGTA CTAAGCTTAC TCTCTTGTTT CTCGCCATCC CTCTCGCCAT TCTCGCCAAT TCTTACCACT ACGCTCGTCC GTTGATATTT GGACTGAGCT TGATAGGGCT GACACCTCTA GCTGAGCGAG TTAGCTTTTT GACAGAGCAA CTAGCTTTCT ACACTGGTCC AACAGTGGGA GGTTTGTTGA ACGCGACTTG TGGAAACGCA ACGGAGCTGA TAATCGCGAT ACTAGCGTTG GCCAATAACA AAGTGGCAGT GGTGAAATAC TCTCTATTGG GTTCAATCCT CTCGAACCTT CTCTTGGTTC TTGGCACTTC CCTCTTCTTT GGTGGTATCG CCAATATCCG AAGGGAGCAG CGGTTCGACC GGAAACAAGC CGATGTGAAC TTCTTCTTGC TGCTTATGGG TCTGTTGTGT CATTTGCTGC CGTTATTGTT AAAATATGCA GCAACCGGTG AAGCATCGAC CTCTCTGATT AACAAAATGT CGCTTACTCT GTCGCGTACT AGCAGCATAC TTATGCTTAT TGCTTACATT GCTTATCTCA TCTTCCAGCT CTGGACTCAC CGCCAATTTT TTGAGGCACA AGAGGATGAT GATGATGCAT ATGATGATGA GGTTACTGTT GAAGAAACTC CAGTGATAGG ATTCTGGAGC GGATTTGCTT GGCTCGTTGG GATGACAATC CTCATAGCAT TGCTATCAGA GTATGTTGTG GCCACTATTG AGGATGCATC GGACTCATGG GGACTATCAG TGAGTTTCAT AAGCATCATA TTGCTTCCCA TTGTTGGGAA CGCGGCTGAG CACGCTGGAG CCATCATTTT CGCATTCAAG AACAAGCTCG ACATATCTCT AGGGGTTGCG TTGGGCTCTG CAACTCAAAT TTCTTTGTTC GTGGTCCCAT TGAGTGTTAT CGTTGCGTGG ATCCTAGGAA TAAAAATGGA TCTCAACTTC AACATCCTTG AAACTAGCTC TCTAGCTTTG GCCATTATCA TCACAGCCTT CACATTACAG GATGGAACTT CTCATTACAT GAAGGGACTG GTTCTATTGT TGTGCTATGT CATCATCGCG GCCTGTTTCT TCGTCGACCA AATTCCCCAG CCAAATGGTA TAGACGTGGG ACTTCAACCC ATGAACAATT TGGGAGAAGT TTATCCAGCT TAAATATGAT TTGATTGATT CGTCATCCAA AACAGAGGAC TTTGTCAGAG GGATTCCTCA AGCATGAAAA TGAGGGAGGG AGCTTGATGA AGACATTTAA GAAGTGATCA CATTAATTGC TGTTTGCTTT CTTTTTCTGT TTGTTGTTG 
Length1559
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14965178.. 14968531
Download Sequence
A.thaliana
AGI-codeAT3G51860.1
Descriptioncation exchanger 3
TAIR curator summary
Alias[ATCAX3][ATHCX1][CAX1-LIKE][CAX3][cation exchanger 3]
Gene coexpression
MR
MR Locus Description
21.6333 Ahg354029
22.0454 Ahg903001 UDP-Glycosyltransferase superfamily protein
23.5797 Ahg918583 Auxin efflux carrier family protein
24.3926 Ahg484123 glutamate decarboxylase 4
24.4336 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
27.5681 Ahg317234 non-specific phospholipase C4
29.1033 Ahg942023 response to low sulfur 4
31.225 Ahg477709 phosphoenolpyruvate carboxylase kinase 2
33.8526 Ahg477692 Kunitz family trypsin and protease inhibitor protein
44.8553 Ahg475116 WRKY family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression