Detail



ID : Ahg485777

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485777|fgenesh2_kg.5__1769__AT3G53830.1
Sequence
ATGAATGGAA ATATCGGAGG AAAGGTTCCG ATTGGGGAAT GTAAAGCGAC TGTAGTTTAC ATGTCCGGTT ACTTACCAGG AGCTGCGCCG GAGAAATCCC CAATTCTCTC TCCTGTTCCC GTGCGTTTAC CGGCGGCTGT TCACGGAGGA GATTCATGGA AAGATGTATG TGGCGGCGGT TGTGGATTCG CTATGGCTAT TTCAGAAAAG GGGAAGCTTA TAACTTGGGG TTCTACTGAT GATGAAGGAC AGAGCTATGT GGCTTCTGGA AAGCATGGGG AAACTCCAGA GCTGTTCCCT CTTCCCACTG AGGCTCCAGT CGTTCAGGCT TCTTCAGGAT GGGCACATTG TGCCGTTGTA ACAGAGACTG GTGAAGCATT TACTTGGGGT TGGAAGGAGT GCATTCCATC AAAGGATACT GTTGGAAAGC AGCAGAGTGG CTCTAGTGAG CAAGGTGAGA TCGCATCACA AGGTTCAAAT ACAGCTAGTG GTATGACACT ACAGAATGAG ACCCGAAAGG TAGGGGAGGA ATCGGTGAAG CGGAGACGGG TTTCAACTGC CAAAGATGAA ACCGAAGGCC ATACATCTGG AGGCGACTTC TTTGCTACAA CACCTTCGCT TGTGAGTGTT GGCCTTGGAG TGAAGATCAC CAGTGTTGCT ACTGGTGGTC GGCATACTCT GGCATTGTCA GTTGAAGATT CATTTGAGGA TGATCATGTT TTTACGGAAG TTTCAGATAT AGGACAGATT TGGGGTTGGG GATATGGAGG TGAAGGTCAA CTAGGATTGG GTTCCCGGAT TAAAATGGTG TCGTCTCCTC ATCTAATACC TTGCCTTGAA TCAACTGGAT CTGGAAAAGA AAGATCTTTC ATATTACATC AAGGAGGAAC AACAACCACG TCTGCTCAAG TTTCTAGAGA ACCTGGTCGG TACATCAAGG CCATTTCTTG TGGCGGTCGT CATAGCGCAG CAATTACAGA TGCTGGAGGG TTAATAACTT TTGGCTGGGG ACTCTATGGA CAGTGTGGCC ACGGAAACAC AAATTACCAG TTAAGGCCCA TGGCTGTGTC ATCAGTGAAG AGTGTTCGGA TGGAAAGCGT AGCAGCTGGA TTGTGGCACA CTATTTGCAT CTCTAGTGAT GGTAAAGTGT ATGCCTTTGG TGGAAACCAA TTTGGGCAAC TGGGAACTGG CACTGATCAT GCTGAGATAT TACCGAGGTT GCTGGATGGC CAGAATTTGG AGGGCAAACA TGCGAAAGCA GTTAGTTGTG GCGCGCGGCA TAGTGCGGTT TTGGCAGAAG ATGGTCAGTT GCTATGCTGG GGATGGAACA AATATGGACA GCTGGGTCTA GGGGACACAA ATGACCGGAA CATTCCTACA CAAGTCCAGC TTGATGGCTG CAGACTGAGA AAAGTGGCGT GTGGATGGTG GCATACATTA CTACTAGCAG ATTTACCCAC TTGAGTTTTC TCAACCAATC ACCAAATCCT CGATAGACAT TTCTGGGTTT TTGCCTCTAG GTTTGACGCT GTACATACAT ACAGACAGGC TTTTTGCTGT GTATGTATTT TCTTCTTCAA TCTTTCCCCG TCTTCATGTT TTTTACTTAG GGAGAGAGCT TTGACTTTGT AGTTTGTATT GTGTAACGTG GGAAAATTGC GGAACAAAGA ATAAAACGGT TTG 
Length1683
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15829291.. 15832367
Download Sequence
A.thaliana
AGI-codeAT3G53830.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg483843 pseudo-response regulator 9
7.34847 Ahg925155 lipases;hydrolases, acting on ester bonds
7.54983 Ahg939472 RING/U-box superfamily protein
9.8995 Ahg495528 B-box type zinc finger family protein
10.3923 Ahg472592 alpha/beta-Hydrolases superfamily protein
11.4018 Ahg493645 P-loop containing nucleoside triphosphate hydrolases superfamily protein
11.4891 Ahg493949 Raffinose synthase family protein
12.2474 Ahg479442 cytochrome P450, family 707, subfamily A, polypeptide 4
14.1774 Ahg490840 squalene epoxidase 3
17.6068 Ahg904747 Protein of unknown function (DUF760)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression