Annotation |
Description | jgi|Araly1|485852|fgenesh2_kg.5__1844__AT3G54500.1 |
Sequence |
CCCATATCCT TAGAGCATGA AGGATTCTGC TGAATCAAGC TGGCGATGTG TGGAGCAATT CGGGAGCGTG ATATAGGTTC TTTGATTCGA TTTTGTTTCT CAAGTCATGT TTGATTGGGA AGAAGAAGAG CTTACTAATA TGATATGGGG TGATGACGGT GAGACAGGCG ACCATATTGT GCCTTTTAAA CAACTTAATA AGAAGGAACA GAGTGAAGAA TCTAAGACTG CTAAACTGGC TGAGCAAAAG ATAACTGGGA CTAAAACTGA CCTCCATGAT GATAAATTGG GGAGCAGTTC AGGCCATAAT GTTGATGACG GGACTCCTCA GCCAGATTTC TGTATGAGCT CATGGTCTGA CTCCACAAAA GCTGATCCAG ATTTGAGGGC GACTCAACTT TCAAAATGCT TAGCTGAGCC AGCCAGATAT GATTCAACAA GAGAGAAAAC GTCTGAACTT GGGAAAGGCC CTGATATTTT TCATAGCTCT GATGAGAGTA AAGAGCAAGG TGATTTTGAT GACTACAGCT GGGCCAACAT TGGTAGTTTT GATGATCTTG ATCGAATGTT CAGCAATGAT GTCCCTATAT TTGGCGATAG CAGTCTCAGC GGTGGTGATG AGTTATGGTC TTCTTCTAAA GATGTTTCCA ATAGCCCAAA ATCATTATCA TCAATGTTGG ACTCTCAAGA TCTAGGATTG GATATTAGAA CTGAGTTTGA GCAACAAGAG AACCAGCAAT TTCCATTGAC TGGAAAAGCC AATGGTCCGT CATCCCAAAG TGTGCCGAGT CTACGTGTAA CTCTAAAGGC TGACCAATAT CGTGAGCATA AGGGTCAACC CTCAGTTGAG GACCAGCCAT ATCAACAAAA TAAAATGATG AAGTTTTCGA AAATGCCTGG GACTTCTGAG GCATGGGCAT TTCATGAGCT GTACGGTCAG AGGATTCCAT CTAGTAATTC TCCTGGAAAG TTGGTAAATC AGTTGACACC GCCACGATCT TCTCTGATGG CTGTTAATCT GCAGAGTGAG TCTGAAGGAT CTGGGACATC ACACTATTCA CATATGCCAA ACCAATACAT GGCTACTTCT GCTTTTGGTA ATCTTGCAAA TCCATATTCT AGTGTGCCTG TAATTTCGGC CGTCCAACAT CCTGATGTTA AGAATCAGTT GATGCATCCT TCTTACAATC CTGCTACTGC TACCTCCGTA AACATGGCAA CAGATGCCTC TGCACGGCCT TCAACAATGA CACCACAGGA AAAACTAGAA AAACTTAGAC GCAGACAGCA AATGCAGGCA ATGCTTGCCA TTCAAAGACA ACAGAAGCAA TTTTCTCATC AGGTGCCTGT AGCAGATCAA TCCATTACTC AAAACTGTCT CCAAGATATT CCACTCCAGC TTGTCGACAA AACTAATATC CAAGGGCTAA CTGCAATGCC TTCCTTTGAT CCTAGTTCAT CTTTGGAACA AGATGATTCT GGCAAATTTG CTGCTGCTGT TGATAATTCA GCAGAATTCT CAGTTCTTTA TCGGCTTCAG GATGTTGTAG CAAAGTTGGA TATGGGAACA CGGACTTGTA TACGGGATAG CTTATTCCGG CTGGCTGGTA GCGCAGCTCA GAGACATTAC ACTAGTGATA CAGCCCACAG TAACAAGACT AGCCAGGATG AGCAGGAAGT TATTCCCAGA GAAGAATCCA GATATAGATA TGCTGGGATG CCAGATACAG AAGCAGTGAC CAACCCCACA GACAGAACTG TGGCTCATTT GCTCTTTCAT AGGCCTTTTG ATATGTTGGC GGCAAAGCGT ATGGAAGGAC CAGAATCACC CGCTTCTTCG AAGATGGGAA CTGAAGAAAA AGGGAATTTT CCTAAATGCA TCATACGAGA GACTCACTTA AATAAGCAGA AAGCTCAAAA GGAAGAAGGA CCTGCAGATT TACTTGCTTT GGGGAATGCA CCCAACTCTG GATCCAGTAG TACTGTTGGT GAGAGGGTTG TTGAAGCATC CCAAGGAAAC AAAAGAAAGT TGTGAAAATT AGAAGTTTAG GTTGCCGTGT TAGAGAGGAG CTTTGGGAAT TTCAGCAGAC TAGACAACAT CTCTCTGCGT CCCTTGAAAC AATCTCCTCA TTGCTCCTTT CTTGTAATTA GATTTTTTTT TGTTACTTTT CAAAAACCTC TTTTGTTACA CGTACCTCCA TGACAACTAC ATTTTGGAAA ACTCGTGTAG TTTGCAATGT TTTTTTCCTC ATTCAAAACC AGATTCAATC TCTTAATACA ATTGTAAGCA C |
Length | 2291 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_5: 16100980.. 16104749 |
Download Sequence |
|
A.thaliana |
AGI-code | AT3G54500.3 |
Description | |
TAIR curator summary | |
Alias | [LNK2][night light-inducible and clock-regulated 2] |
Gene coexpression |
MR |
MR | Locus | Description |
2.23607 |
Ahg935667 | circadian clock associated 1 |
2.82843 |
Ahg897595 | cycling DOF factor 3 |
3.74166 |
Ahg482070 | salt tolerance homologue |
4.58258 |
Ahg470177 | Homeodomain-like superfamily protein |
6.7082 |
Ahg494217 | tonoplast dicarboxylate transporter |
6.9282 |
Ahg928955 | |
8.12404 |
Ahg493645 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
8.3666 |
Ahg488445 | conserved peptide upstream open reading frame 10 |
8.48528 |
Ahg945327 | B-box type zinc finger family protein |
8.94427 |
Ahg477481 | conserved peptide upstream open reading frame 9 |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
|