| Annotation |
|---|
| Description | jgi|Araly1|485918|fgenesh2_kg.5__1910__AT3G54990.1 |
| Sequence |
ATGTTGGATC TTAACCTTAA ACTCTTTTCT TCTTATGACG AAGATGATCA AGATCGGAAA GTACCATTAA TGATCTCAAC CACCGGTGAA GAAGAATCTA ACTCCTCTTC CTCCTCCACA ACAGATTCTG CAGCAGGAGA TGCTTTCATC ACTTTTGGAA TTCTCAAACG CGATGATGAC GTTGTTCCTC CTCCTCCTCC TCCTCATAAA GAAACAGGAG ATCTCTTTCC GGTGGTGGCT GATGCTCGTC GGAATATTGA GTTCTCCATC GAGGACAGTC ACTGGTTGAA TCTTTCTTCT TTACAAAGAA ATACACAGAA AATGGTGAAG AAAAGCAGAA GAGGACCAAG GTCACGCAGC TCCCAATATC GTGGCGTCAC TTTTTACCGT CGCACCGGTC GTTGGGAATC TCATATTTGG GATTGTGGAA AGCAAGTTTA TTTGGGCGGG TTTGATACTG CTTACGCAGC AGCAAGGGCG TACGACCGAG CTGCTATCAA ATTCCGTGGT CTCGATGCAG ACATCAATTT CGTCGTGGAT GATTATAGGC ATGACATCGA TAAGATGAAG AATTTAAATA AGGTGGAGTT CGTGCAAACA CTTAGGCGAG AGAGTGCGAG TTTCGGAAGA GGAAGTTCCA AATACAAAGG CTTGGCTCTT CAAAAATGCA CCCAATTCAA AACTCATGAT CAGATTCATC TCTTTCAAAA CAGGGGATGG GATGCAGCAG CAATAAAATA CAATGAGGTG GGAAAGGGAG AAGGGGCCAT GAAGTTTGGT GCCCATATCA AAGGAAATGC TCACAGTGAT CTTGAACTAA GTCTTGGAAT TTCTTCATCA TCGGAAAATA TAAAGTTGAC AACGGGAGAT TACTATAAGG GTATCAATCG GTCCACGATG GGTTTATACG GTAAGCAATC ATCGATATAT TTACCTATGG CGACAATGAA ACCTCTGAAG ACAGTTGCAG CATCATCAGG ATTCCCATTT ATCAGCATGA CCAGTTCCTC TTCCTCCATG TCCAATTGTT TTGATCCATA G |
| Length | 1041 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16310267.. 16313155 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54990.1 |
| Description | Integrase-type DNA-binding superfamily protein |
| TAIR curator summary | Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering. |
| Alias | [SMZ][SCHLAFMUTZE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.6095 |
CBF2_halleri | C-repeat/DRE binding factor 2 |
| 16.1245 |
Ahg483843 | pseudo-response regulator 9 |
| 28.2489 |
Ahg472405 | |
| 35.2136 |
CBF3_halleri | dehydration response element B1A |
| 35.2987 |
Ahg477874 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 |
| 53.066 |
Ahg481221 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 53.5724 |
Ahg487770 | hydroxyproline-rich glycoprotein family protein |
| 54.3875 |
Ahg485985 | Regulator of chromosome condensation (RCC1) family protein |
| 59.6238 |
Ahg472476 | UDP-glucosyl transferase 85A2 |
| 61.8708 |
Ahg480170 | glycine-rich protein 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|