Detail



ID : Ahg485985

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485985|fgenesh2_kg.5__1977__AT3G55580.1
Sequence
ATGAATGGCG AGGGAAATTT GGAGACTGGT GGAACTAGCG CCGCCGCACC AAAAGAGGAG GAGGAAGTTG TTGGTCAGAG AGTAGTGTAC ATGTGGGGTT ACTTACCGGG AGCTTCGCCG CAACGGTCTC CTCTGATGTC ACCGGTCGAA GTGAAGATTC CTCCGGCTGT TGAAAGTTCC TGGAAAGATG TCTATGGTGG TGGATGCGGT TTCGCAATGG CTACTGCAGA GTCGGGGAAG CTAATTACAT GGGGTTCGAC AGATGATCTA GGTCAAAGCT ATGTCACATC CGGCAAGCAC GGTGAGACTC CAGAGCCATT TCCTCTTCCT CCAGAGGTTT GTGTACAGAA AGCTGAGGCT GGATGGGCTC ATTGTGTGGC AGTAACAGAG AATCAAGAAG TTTATACATG GGGATGGAGG GAATGTATAC CCACAGGGAG AGTGTTTGGA CAAGCAGAGG GAGATTCGTG TGAAAGAAAC ATTTCCTTCT CGACAGAGCA AGTGAGTCCC AGTTCTCAAG GGAAAAAATC TAACGGTGGA ACGTCTTCTC AAGTTGAAGC TAGAGGTGAA CCAACAAAGA AAAGGCGGGT TTCACCGTCA AAGCAAGCTG CTGAAAATGC ATCACAGTCT GACAACATTG ACCTCTCGGC ATTGCCTTGC CTTGTATCGT TGGCGCCTGG AGTTAGGATT GTCAGTGTTG CTGCTGGTGG ACGTCATACT CTAGCATTAT CAGATATTGG ACAGGTGTGG GGTTGGGGTT ATGGAGGAGA AGGACAGCTT GGATTGGGCT CCCGTGTGCG CCTAGTCTCC TCTCCTCATC CTATTCCATG CATTGAGCCT TCTTCTTATG GAAAAGCCAC CAGTTCTGGT GTAAACATGA GTTCAGAAGT GCAATGCGCC CGAGTTCTTG GAAGTTATGT AAAAAAAATT GCATGTGGAG GGCGACACAG TGCTGTGATT ACAGATACTG GAGCGCTCCT TACATTTGGT TGGGGGCTTT ATGGACAGTG TGGCCAAGGA AGTACAGATG ATGAACTAAG TCCTACATGT GTGTCGTCTT TGTTGGGAAT CCGAATAGAA GAAGTGGCTG CAGGTCTATG GCACACGATC TGTGCTTCAG CTGATGGGGA TGTATATTCG TTTGGTGGAA ACCAATTTGG ACAGTTAGGT ACTGGTTGTG ATCAAGCTGA GACTCTTCCA AAACTATTGG AGGCTCCAAA CTTGGAAAAT GTCAATGTAA AAATCATCTC CTGCGGTGCT CGTCACACCG CTGTAATCGC AGATGAAGGG AAAGTATTCT GCTGGGGATG GAACAAATAC GGGCAGTTGG GTTTAGGAGA TGTGATAGAC AGGAATGCTC CATCAGAAGT CAGAATCAAA GATTGCGTCC CCAAAAACAT TGCATGCGGT TGGTGGCATA CTCTACTTCT AGGCCAGTCC TCTCTCTGA 
Length1449
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16594705.. 16597555
Download Sequence
A.thaliana
AGI-codeAT3G55580.1
DescriptionRegulator of chromosome condensation (RCC1) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg311978 galactinol synthase 3
3 Ahg495838 Fibronectin type III domain-containing protein
3.16228 Ahg952470 delta1-pyrroline-5-carboxylate synthase 1
3.4641 Ahg949787 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
3.60555 Ahg932059 B-box zinc finger family protein
3.74166 Ahg493949 Raffinose synthase family protein
3.74166 Ahg483012 delta1-pyrroline-5-carboxylate synthase 1
4.12311 Ahg487518
4.47214 Ahg941255
4.89898 Ahg930279 Chlorophyll A-B binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression