Detail



ID : Ahg486491

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486491|fgenesh2_kg.5__2483__AT3G60220.1
Sequence
TTGAAAGCAA AGTGAAAAGC CAATTGATTT GATTTAACTT TTATGGAATT AAATATAGAC AGTTTGAGTT GGTTCAATGA CATTTATTTC TCTGCCTCTT TCCCAACGTC CCCATGGATT CTCTCATCAA TCCCAGCCAT GGCGGAGGAA ACTACGATTC TCACTCTTCT TCTCTCGATA GTCTCAAACC AAGCGTACTA GTCATCATTC TCATCCTTCT AATGACTCTT CTCATCTCCG TCTCCATTTG TTTCCTCCTC CGTTGTCTCA ATCGCTGTAG CCACCGCTCC GTTATCCCTC CGTCGTCATC TTCCACTTCC GCCGCAACCG TAACTTCCGA TTCCCGACGA TTCTCTGGAC ATCGAGTCTC TCCCGAAACA GAACGATCCT CGGTGCTTGA TTCGCTTCCG ATTTTCAAAT TCTCCTCCGT CACTCGCCGA TCTAGTTCAA CAAACTCCGG CGATTGCGCC GTCTGTTTGT CGAAATTCGA ACCGGAGGAT CAGCTCCGTC TTCTTCCTCT CTGTTGTCAC GCTTTTCACG CCGATTGTAT CGACATCTGG CTAGTCTCGA ACCAGACTTG TCCTCTCTGT CGTTCTCCTC TCTTCGCTTC AGAGTCCGAT CTAATGAAGT CTCTCGTCGG CGGAAACAAC AACAGCAACG GTGGAGAAAA CAGCTTCCGT CTCGAAATCG GATCCATCAG CCGTCGTCAA ACAGAATCCG TAGAGCAGCA CCGATCTTAC TCAATCGGTT CGTTCGATTA CATAGTAGAC GACGTAGATT CAGAAATCTC AGAGTCAAAT TTCAACCGTA GAAGCATATC GGCAAAACAG GAAGACGCGA CTACAACAAC AACAACAACG GCGGTTACGT CTAATCCGGC GTCGTTTGAA GCTAGTTTAG CGGCGGATAT AGGTAACGAT GGTTCTAGAA GCTGGCTCAA GGATTACGTG GACAGACTCT CACGAGGTAT ATCGTCGCGT GCAATGTCGT TTAGAAGCTC TGGTAGATTT TTTACCGGGA GTAGCCGTCG GACTGAGGAA TTGACGGTGA TGGATTTAGA AGCCAATCAT GCCGGCGAAG AGATAAGTGA GCTTTTCCGG TGGCTTTCAG GGGTGTGAGT GACTGGTGAG TCGGTGAAAT TTGTTCATTC GCTTGGAAAA AAAAACAGAG CATTACTTTT GGTTTGTACA TATAAACACT ATCTGAAGTT CTTTGCTTCA ATTACGGGAT TGTTTTTTCT GACGATATAA CAGATGAATT CTCTAGTTAT ATATTACTTC TAATGATCTA TTTTTTCTT 
Length1299
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18660430.. 18661899
Download Sequence
A.thaliana
AGI-codeAT3G60220.1
DescriptionTOXICOS EN LEVADURA 4
TAIR curator summaryEncodes a putative RING-H2 zinc finger protein ATL4 (ATL4).
Alias[ATL4][TL4][TOXICOS EN LEVADURA 4]
Gene coexpression
MR
MR Locus Description
23.4094 Ahg927503 Leucine-rich repeat (LRR) family protein
31.4643 Ahg471382
32.5576 Ahg491249 Leucine-rich repeat protein kinase family protein
46.3033 Ahg933179
46.8615 Ahg480375 arabinogalactan protein 9
57.576 Ahg495659 FASCICLIN-like arabinogalactan 1
57.6888 Ahg485285 IQ-domain 21
59.1608 Ahg472578 Plant invertase/pectin methylesterase inhibitor superfamily protein
62.0322 Ahg482667 xyloglucan endotransglucosylase/hydrolase 32
72.374 Ahg482699 protamine P1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression