Detail



ID : Ahg486997

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486997|fgenesh2_kg.6__131__AT5G02200.1
Sequence
AAAACCATGG AGGATGCAGA TGATAGTTGT AGCCCATCGC TGGATCATAG GTTTTTCTTT TCAACAAAAC ACAAAAAAAA AAATATCTTC TTATGTTTAT ACAAAACAAC TGTGTGAATC TATGCAAAGA TTGTAAACTT GATGTTAAAA CTTGTATCTT GAATCTGCGA AATCATCCCA AGTTTCTCAG ATACTCTGCT CGAATTCTGA AATTACTCTC TTGTGTTCTG CTTTTGTATG TTTCCCGCAA GTTTTCATCT TCTTTGAATC TTAAACTTCC TGAGCTACAT TGTATCGTGT CCTTAAGATG TTTGATGGTT TTCCTCACTT ATGTTTTTAA GGTGAAGTGT GTTGATGGCT TAACTGATAC TCAACACTTG AATCTTATCT TTGCTCTATA CATATTTTAC TTGTGGATTT AGATTCTGGA CTAATTTGTG ATCCTTTTCT CTTTATCTCA GTGGTATCAA TGGTAAATGT TTTTTCTTTT GTTAAATGGT GTGAATACTT TATGGATAGT TGTCATATTG TGGATATGAC CCTTTATGGT ATGAGCTGAG TATTAGTCTT CTTTTTATCT TTTACCTCTT TTGTCGCATG GAAAATAAGT CGATTCATGA CCTTCACTAT ACAATATATG GTTTCAGCGA TATCAACGAT CCGATGATAG TTGCTGTGGA ATCTCTAGAC TCAAGCAAAA AGAGAAAACT GCGTGCTGAA GAATTAGACT TGTTACCCCT ACCAAAACAC TTTTGTCTGG AGCAACAAGC TTCTCTTGTT GATTCTTCAT TTCCATCATC AGATATAGAA TATGCAGAAT GCTCTTATGC CATGGAGGAC ACAAAAACCA GCGATGAGGC CTCCTCTTCT GCATCCTTTA CAGGCCCTTC TTTGTACATG TTTAAAGACT CTATTTATTC TACCGGAAGT TCTAGTTCTG GTTATGCTGC TACATCAAGC ATAGAACAAT GTTTTTCCAA AGTTGATCAC AAAACACAAG AAGATGCTGA AGACTTTACT CACATGGAAT TCATTTGTCA CGACTCCGAG TTTGCGGTTG AAGATCTTCA AGAGGTTCTG AATCCAGTTG GGTCTTATGT TCTTTCTTCT GCAAGGTGGA GTGTTGGCAA CCAAGATTAC GAAGAAGCTA CCACGAAACC AACCATTGAT CAAGAGTTTG AGCAGTACTT TTCAACACTC ATGATGTAAA CAACATGAAT TTATCTACAT ATGTATCAGT ATCACTAATC 
Length1250
Protein Sequence
Protein Residue
Map Locationscaffold_6: 510805.. 512177
Download Sequence
A.thaliana
AGI-codeAT5G02200.2
Descriptionfar-red-elongated hypocotyl1-like
TAIR curator summaryEncodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA.
Alias[FHL][far-red-elongated hypocotyl1-like]
Gene coexpression
MR
MR Locus Description
2 Ahg473278 nuclear factor Y, subunit A7
11.8322 Ahg492349 purple acid phosphatase 24
13.7113 Ahg476598 glutathione S-transferase TAU 10
14.1421 Ahg488832 RING/U-box superfamily protein
15.6844 Ahg931035 monogalactosyldiacylglycerol synthase type C
18.4932 Ahg928710 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
19.7484 Ahg927841 lecithin:cholesterol acyltransferase 3
25.9037 Ahg477785 sodium hydrogen exchanger 2
28 Ahg908901 Disease resistance protein (TIR-NBS class)
33.2265 Ahg919447 non-specific phospholipase C1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression