Detail



ID : Ahg487134

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487134|fgenesh2_kg.6__268__AT5G03555.1
Sequence
GACTCAATGG TCTCAAATTG CTTAAGCCTT ACTCTCCATC CCAATCTTCA TCCCCACAAA CACAATCGTC ATTCTCTTTC TTCCTTTAGA TCCCAGACAA AAGCTAAACT CTATCAACAT GTCTCATTCA CAGATTCAAG CCACAAGAGA TCCTACACTT CTTGTGTGTC TACCTTTGAC TCACAAAACA AAAGTAGCAA ACACTATGAA TTGGGCAAGC ACAACTTCAG TCCGAGCCGG CCTGGTTACA ACTTGGGTTT GAGCCGATCC GGTGTCATCC GCCCACGACT CTCGGCGATG ACCGGCTCAG AATCCAATGA CTTCGGGTAT GACGAATCCC AATTCGACCC ATCTCTCACG AATGAAGACT TGAAACCGAC AACACCAAGC CAGAGAACGT TTTCATGGTT GGATATGTCA AGTTTATGGA TCGGTCTCGT GGTTGGTGTG CCTACTTACT ACCTCGCCGG GAGCCTAGTG GATCTTGGCA TGGCGTGGTG GCAAGGGATA GCCACAGTGG TTGCTGCCAA CCTAATACTG CTCGTGCCGC TGGTCCTCAC CGCTCAGCCT GGCACTCTGT ACGGAATTTC CTTCCCTGTC CTTGCTAGAT CATCCTTTGG TATCCGTGGA GCTCACATCC CGACTCTACT CAGAGCATTA GTCGGTTGCG GATGGTACGG TATCGAGACA TGGATCGGAG GAGAAGCCAT CTTCTTGCTC TTACCGGCTC ACATTAAGAA CTCTGCTTTG TCTCATACGC TACCCTGGCT CGGCACTTCT CCGCTTGAGT TCTCTTGTTT CATCGTCTTC TGGTTGGCTC AGGTTTGTAT TGTCTGGAGA GGAATGGACG GAATCAGAAA GCTAGAAAAG TACTCAGCTC CAATTCTGAT CAGTCTCACT TCCTGCCTCC TTGCCTGGTC CTATCTCAAA GCAGGTGGAT TTGGTCACAT GCTTTCCTTG TCATCCAAGC TAACCTCTGC TCAGTTCTGG ACTCTCTTCT TCCCCTCGCT AACCGCAAAC ATAAGCTTCT GGGCAACTCT AGCTTTAAAC ATCCCTGATT TTTCACGGTT TGCTAAATCC CAGACGGATC AAATCATCGG TCAAGTTGGT CTTCCCGTTT TCATGGGTTT GTTTACGTTC GTCGGCGTAG CTGTTACGTC CTCCACAAGT ATCATCTTTG GAAGAGTCAT CTCCAATCCG ATTGAGCTTC TCGGTCAAAT AGGAGGCCTC GCCACAACTC TACTCGCTAT TGTTGGAATA TCCCTAGCCA CACTCACTAC AAACATAGCT GCAAACGTGG TCGCGCCAGC AAATGCGCTT GTGAATCTAA ACCCTAAGTT TTTCACATTC GGAAGAGGAG CCTTCTTGAC CGCAGTTCTT GGTATCGTGT TTCAGCCATG GAGATTGCTC AAATCAAGCG AGAGCTTCGT GTACACTTGG CTCATTGGTT ACTCAGCGCT TCTTGGTCCA ATCGGTGGCA TAATTCTCGT CGATTACTAC CTGATCAAGA AGATGAAACT GAACATTGGA GATTTGTACT CTTTGAGTCC CTCCGGCGAA TATTATTTCT CTAAGGGATA CAATGTCGCA GCGGTTGTGG CTTTGGTCGC CGGAATAATC CCAGTCGTGC CTGGTTTTCT ACACAAGATC AGAGCTTTGT CGAAGATCTC AAATGGGTTC GTCGTTGTTT ACGACAACGC TTTGTTTTTC AGCTTCATCA TCGCAGGATT TGTCTATTGG ATCATAATGT CTCGTCTGGG AAGGAAACAG AGCTCGTTGT CTTCTTCTTC ACGGCCGCTT TTGTAAATCT TGTCATTTAA TTGGTTTCGT AAGTATAAAT ATAAGTTATC AGATGTAAAA TTAAACAGAA GAACAAAAAA GGAAATAAAG ATTTGTCATT ACGGATTTAA TT 
Length1912
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1011629.. 1013523
Download Sequence
A.thaliana
AGI-codeAT5G03555.1
Descriptionpermease, cytosine/purines, uracil, thiamine, allantoin family protein
TAIR curator summary
Alias[AtNCS1][NCS1][nucleobase cation symporter 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg929326 SPA1-related 3
3.60555 Ahg474897 Glutaredoxin family protein
5.2915 Ahg331125 Leucine carboxyl methyltransferase
6.78233 Ahg488595 Homeodomain-like superfamily protein
7.54983 Ahg480385
10.7238 Ahg342260 B-box 32
12.9615 Ahg477472 CONSTANS-like 2
13.4164 Ahg483929 NAD+ transporter 1
14.6287 Ahg908217 Plant protein of unknown function (DUF827)
14.6969 Ahg488432 CONSTANS-like 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression