Detail



ID : Ahg487176

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487176|fgenesh2_kg.6__310__AT5G03970.1
Sequence
TTCAGCGTTC GTCGTCATCA AGTGTCTGCA ATGTCTTGTT CTGCCAGGTT AAAAACCAGT TTGGGGATGA CTTCTGCTTT GAGTGCTCAT GAGGTTCTTA ACAGTAATGA TACTATGTGT GAGATTCTTC TCCTGCTTCC ACCAGAAACA ATCTACAAGC TGATTTTGGT GTCCAAGAGG TGGCTTCAGA TTATAGCCAG CCCTTACTTC CGTCACACTT ACTTAGCCAA GTGGAACCCT AGCTTTGAAC TCATTGGCTT CCTCGTCTGT AGCTCAACGT ACCTTGGAAG ACGCGTAGAT GGAGCCCGTC GCCCTCGTGC TGAGCCATCG CTTCCTTTAC TCTCAACCAG CAGTATTGGT GATGAAATTG AATCCTCTGG CATTCTGAAA AAACTTGGAT ACTACATCGA CTCTTCAGAC GGTCTTTTAC TTTGTGGCCG CCATCCAAAA GCTTACTACT TGTGGGATCC AAGTACACAG AAGCAGCAGC AACTTCCACG TCCCAGAGTT CATTTCGAAG AACTTTGTAT GTCTTTGATT ACTGAGGATT GTCCTGATAA AGGGTTTAGC TACAAGGTGA TCCGGGCAGA GAGTGTAGGC TTTACTGCTC AAAGTACAAA GTTGAAGGTA GAGACTTTTT CCTCGAAAAC TTCTACGTGG AGCTACTCAG AGCTTACTTG TCCTGAGCCT ATATCTCTCA GTCCGTGGAC TCTTGGTAGA GTGATCAAAG GTGTTGTTTA CTGGCATGCC AGAGGAGGTA AAGTTGCCAT GTATGACTCA AACAGTGAGG AGAAACGTGT GGATATGATA AAGCTTCCGA AAACATATGA TTATGATGAA CAGGTTCTGG GCGAAACCAT TGATGGCGTT CGGACTAAAG AAACACAGCT GCTTGCGTTC CTCAATCAGA AGTCGGACTC GGTTTTCATC AGGTGTGAAA CCCACATCTT CATCTATGAC ACAGAGACTA AAAGGGTCGA AGTAGTTCAG TACCAAGGAC GAAAATCAAC ATTCGTTTGG GATTACTGCA AAGTCGTGCC TTACTTTCGA CGTACCTGGC CTTCTTCTCC TCTGTTTGAA AACAATGTCA TGATGATCGA CACTCCTCAA TGCAACGCCT CTTCTGCAGG AAGTAACTAA GTAGTTTACG CTATTAATCA GTTTTTGTGT AGGCCATTGA ACTATCGTTT ATGTTTTGTT TGACCATCGA TGAACCTCTC ATGGATTTGA TGT 
Length1233
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1212444.. 1214349
Download Sequence
A.thaliana
AGI-codeAT5G03970.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg473913 Primosome PriB/single-strand DNA-binding
6 Ahg900563 tRNAisopentenyltransferase 2
9.48683 Ahg923473 TBP-associated factor 15
22.9129 Ahg943001 Mitochondrial substrate carrier family protein
24.4949 Ahg490436
25.923 Ahg947531
26.4575 Ahg470644 Protein of unknown function DUF455
27.9106 Ahg476679 Zinc finger C-x8-C-x5-C-x3-H type family protein
29.0517 Ahg320642 RNA binding (RRM/RBD/RNP motifs) family protein
32.3419 Ahg947562 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression