Detail



ID : Ahg487345

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487345|fgenesh2_kg.6__479__AT5G05520.1
Sequence
GGAGGAGCCG TCAAATTGAT TTCGCCGATT TGCTCATCTC TCAGTTGCTT TCCCTCCTTC TCATGGCGAA TCCGACGGAG AAACCCGAAC CGATTCCTTC AACACCTAAA CCCGAGCCTA AAGATGAAAG AGAAGAGCTA GAAGACATTA ACGGCGGAGA AGAAGAAGAG GAAGAGTATG AGGGCGAAGA CGATGGGAAA CCTCGAACGC GAGAGGATGC AATCTCGGAT AGGATCAAAG CTGAGTCTCT GTTCCGTCGT ATGCGAGCAA CTCCGGTCGC TGTGCGTGTT CACGACGTGA TCGTCAAGGG AAACGAGAAG ACTAAGGATC ATGTCATCGA GGCTGAGGTT GATGTTTTGA GGCAAGCGAC TACGTTGCAG GAGCTTCTCA AAGCCTCTAA GGTTGCCAAT TTCAATCTTC AAGCGCTTGA TATCTTCGAT GCTGTCAAAA TTACGCTTGA TTCTGGTCCT CCTGAGCTTC CTGGTACCAC CAATGTGGTC ATCGATGTTG TTGAGAGCAA AAGCCCTTTC ACCGGCCAAA TCGGAACTTT CACTAAAGCC GAGGCTAGAT CATCAAGCCT TGAAGGCTCT TTGAAGTACA AGAACATTTT TGGTTATGGA GATATCTGGG ACGGGTCTCT TGCCTATGGC TGTGATCACT CTACTGAGGT CGGCTTAGGG ATGTATTTGC CAAGGTTCAG AGGGCGTCCT ACTCCATTTA CGTCGCGGGT ATATCTTTCT ACCCAAGATT GGCTTAAGTT CTCATCTTAT AAAGAACGAG CTCTTGGTCT TTCCCTCGGG CTTATCGCTA GCAAGTATCA TGAGCTGGCC TACAATATTG CATGGCGTAA CGTGATAGAC CCATCGCAAA TGGCATCAAG ATCAATAAGG AGACAGCTGG GTCATAATTT GGTTTCTGCT CTGAAGTACA CTTTCAAATT TGACCAGAGA AACTCATCCT TGAGGCCAAC ACGAGGGTAC TCTTTCATCT CTACTTCTCA AATAGGTGGT CTTGCGCCTG ATAGTCGAAC ACTCCGCTTT TTGCGCCAGG AAATCGACCT CCGATATGCT GTTCCACTCG GGTTTTATCG TGCTGCTCTG AACTTTGGTG TAGCTGGGGG AATCACATTT CCATGGGGAA GCGAATACAA GAGCAAAGCT TCTTGTATAC CTGAGAGGTT CTTCTTAGGT GGTAACATAT CACCTGTGTG TTCTTTGGGA GGACCATCTG CGTTATGGGG ATTCAAGACT AGGGGATTGG GTCCTAACGA GCCAAGGAGG GAAGTACAAG ACGATGAGAG TGGTAACACA TATGAACGGG ATTTTGTGGG AGGGGATGTT GCGGTCACTG CATTTGCAGA CCTCTCTTTT GATTTCCCAT TGAAATGGTT CAGAGACAGA GGAATCCATG GTCATGTGTT TGCATGTGCC GGTAATATGG CGGAATTATC AGAGAACAAG TATAGGAACT TCACTGCTCC AAAGTTCTTG GAGACATTCA GAAGCTCAGT TGGTGCAGGA ATCGTGGTAC CAACTAGTCT ATTTCGCATG GAGCTTAACT ACTGCCACAT ACTGAAGAAA CAAGAACACG ATCGAGCGAA ATCTGGATTT TTCATGACAT TCTCAACATC ATCTTAATGA TACCTTTGAT GATATCTTAA TTGTGGCTCG CACTCGCAGG GTCATGGCGG AATCCTTTGC TTTTGTTTTC CATCAGCTTT CATTGTTTAG TTTTTTGTTT GGAATTGAAA CTGTGAAAAT TTTAGAGAGA GCTTGCTTAC GTTATGTGCG GATTGTTCTT GGGAAGAAGA TAGATTAAAA ATAAAAATGA ACTAAAGTTG ATTTGTTTTA AA 
Length1852
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1932491.. 1934866
Download Sequence
A.thaliana
AGI-codeAT5G05520.1
DescriptionOuter membrane OMP85 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.68115 Ahg482666 glucan synthase-like 8
18.4662 Ahg476461 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
19.3391 Ahg479083 mitotic phosphoprotein N' end (MPPN) family protein
22.2711 Ahg489215 Mov34/MPN/PAD-1 family protein
29.9666 Ahg474459 phosphoenolpyruvate carboxylase 1
31.0805 Ahg912263 RNA-processing, Lsm domain
41.3521 Ahg477251 Pre-mRNA-processing-splicing factor
43.6348 Ahg903917 Flavin containing amine oxidoreductase family protein
43.8178 Ahg945666 Protein of unknown function (DUF1682)
46.594 Ahg921308 CYTOCHROME C-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression