Detail



ID : Ahg487518

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487518|fgenesh2_kg.6__652__AT5G06980.1
Sequence
AGCCACTAAC TAAAGTTCAA ACTCACGCGC TCTCCACTTC CTCTCTCCAA CTTGCTTCTT TGTCTTCTCT CTCTCTCCTC CTTCGCACTC ACAAATCTAC AGAAGAAGAA GATAGACTCA TAATCTTTTG GATTTGGATT TAGATCTGAT CTTAAAGGTT AAAGTATCAT TCATGGATCG TTATTCGAGG AGGAATTTAG AGGATCTTGT TGTGCCCAAC TATCAAGAGA CATCAGATTC ATACCCTTCT CCTGATATGT GGGGTACTGG ATGGAGCATG AACTCTTCAG AAGCTGCTGA GAAATGTTTT GATTATGATG TCATTCACAA TGGTTTCAGT GGAGGATTAT ACAGTCAGAT GCAGATGGAG ATGGGAACTA GTGAACAAGT AGAAGAAGAA ACTAAGAGGT TAAAGGCTAG TGGTTGTTTT GACCGTTCGC TTCATGACTT TGATGAAATC CAACAGATGG ATGACATGTT CTTAAGTTCC ATTTTGGAGG ATGTTCCAGG GAATGAGAAT TTTCTTTCTT TCAAGGAGTC GGATACTAAC AACAGCTCCG GTTCTTCCTC TGCGTATCTC GACACTACCG ATGGCAGGGA AGTCCCTATG TTCCATTACA ACTGGGAAAC TTGTCAAGAC ATGCCACTTA TGGAGGAGGA CGCACCTATG AATCTGTGTG AGGAGAACAT GGAGGAGGCA TCTGCTGAAG AAGTGGTGTT GCAGGATTTA CAAAGGGCTA CAGAAATGTT GACTGATGAT GCCCGCAAAT GCTTCCGCGA TACCTTTTAC CGACTCGCAA AGAACTCACA ACAGAAGTCA GACTCCAACC CGGACGAGTT CCTTGAGGAT AGAACCAGTA GGGAAAGTGA ACTGGAAACC AACTCCATCG ACAGAGCTGT CGCCAATCTC ACATTCAACA AGATGGAATC CAACATGAGA AATATGCCTC CACCAAAGAG ACTTTCTTCT GTTCAAGGAT AATGTATATA TTATACATAT GTGCGTGTGT ATCTGTGCTT GGCTTGACTT TTCCAAGCTT CAGTTTTGAT CTGTTTCGTT AGAGTCTGAC TCTCGCTTCT GGATTTCCAA TTTCTTATGC TATATGTTAT TTACTGAGGG AAACCTATGA AAGTACATTA CCCCATGTAG AATCTGTTGT TACAATGTAT CAAAAGAGAT ATAAGAGGAG ACACAGAAAC ATATCT 
Length1206
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2559067.. 2560948
Download Sequence
A.thaliana
AGI-codeAT5G06980.4
Description
TAIR curator summary
Alias[LNK4][night light-inducible and clock-regulated 4]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg928955
3.87298 Ahg945327 B-box type zinc finger family protein
4.12311 Ahg485985 Regulator of chromosome condensation (RCC1) family protein
7.4162 Ahg483843 pseudo-response regulator 9
7.74597 Ahg482070 salt tolerance homologue
8.12404 Ahg932059 B-box zinc finger family protein
9.8995 Ahg495528 B-box type zinc finger family protein
11.3137 Ahg495863 CONSTANS-like 5
12.2474 Ahg479810 CBL-interacting protein kinase 7
13 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression