| Annotation |
|---|
| Description | jgi|Araly1|487800|fgenesh2_kg.6__934__AT5G09790.2 |
| Sequence |
ATGGCCACAT GGAGCGCTTC CTCTCCCACG GCGTCTCCTT GCTCATCCAG GCGACGGACG AAAGCTCCAG CTAGACGCCC TTCCTCCGAA TCTCCACCAC CGAGGAAGAT GAAATCAATG GCTGAGATAA TGGCGAAATC TGTCCCTGTG GTTGAACAAG AAGAAGAAGA AGACGAAGAC AGCTACAGTG ACGTCACCTG CGAGAAATGT GGCTCCGGAG AAGGAGACGA TGAGCTTCTT CTCTGTGACA AATGCGATAG AGGGTTTCAC ATGAAATGCC TTAGACCGAT CGTTGTTCGT GTCCCCATTG GACCTTGGCT TTGTGTCGAT TGTTCCGACC AACGACCTGT AAGAAGGTTA TCTCAGAAGA AGATTTTGCA TTTCTTTCGG ATTGAGAAGC AAACTCACCG AACAGACAAA TTGGAATTGA GTCAAGAAGA AACTAGAAAG CGGAGACGAT CTTGCTCTTT GACTGTGAAG AAGAGAAGGA GAAAACTCTT ACCTTTGGTT CCATCAGAAG ATCCTGATCG GAGGCTTGCA CAGATGGGCA CACTTGCTAC TGCATTAACG GCATTGGGTA TCAAATACAG CGACGGCTTA AATTATGTTC CCGGAATGGC TCCTCGGTCT GCAAATCAAT CCAAGTTCGA GAAAGGTGGG ATGCAGGTGC TATCGAAAGA AGATTTAGAG ACATTGGAAC AATGTCAATC TATGTATAGA CGAGGAGAAT GCCCTCCTCT CGTTGTGGTA TTCGATCCGC TTGAAGGTTA CACAGTTGAA GCAGATGGTC CTATAAAGGA CTTAACATTC ATAGCTGAAT ATACAGGGGA TGTTGATTAC TTAAAAAACC GAGAAAAAGA CGATTGTGAC AGCATCATGA CTCTCCTTTT ATCAGAAGAT CCTTCGAAGA CTCTTGTTAT CTGTCCCGAC AAGTTTGGAA ACATATCTCG CTTCATTAAT GGCATCAACA ATCACAATCC GTTTGCTAAG AAGAAGCAGA ACTGCAAATG CGTGAGGTAT AGCATAAACG GTGAATGTCG AGTTCTTCTA GTGGCTACAC GCGATATATC GAAGGGGGAA AGGCTCTATT ATGACTACAA TGGTTATGAA CATGAGTATC CTACTCATCA CTTCCTCTGA TCTTTCAATT CTAACAGTTC TACAGAGTCT CTAGATCAGA TGTTCTTTTT GTTGCCATAT TACAGGTCAA TTAGAAATGT CTGAATTATA TGTTATGCAT TATTAATTAT GAAGTTAGCG GTAGAATAAT TGGATTTGGA ATGGCAGGCA TTATAGAGAT TAAGGCAAAT GTCAATGGCT GAACTTTTGT TTGATATCAA ATGAAATCCT AACCTTTTT |
| Length | 1359 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3703468.. 3705538 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G09790.2 |
| Description | ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 |
| TAIR curator summary | Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. |
| Alias | [ATXR5][PDE336][SDG15][ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5][PIGMENT DEFECTIVE 336][SETDOMAIN GROUP 15] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.5698 |
Ahg318024 | XH/XS domain-containing protein |
| 59.4306 |
Ahg491189 | SH3 domain-containing protein |
| 66.2873 |
Ahg894546 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 78.9747 |
Ahg893605 | AAA-type ATPase family protein |
| 83.006 |
Ahg474672 | GTP-binding protein-related |
| 89.5991 |
Ahg321462 | actin 1 |
| 93.5307 |
Ahg485480 | Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) |
| 93.9894 |
Ahg480622 | associated protein 19 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|