Detail



ID : Ahg488125

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488125|fgenesh2_kg.6__1259__AT5G13090.1
Sequence
CATGAAAATG AAGAAGAAAG GAAAAGTTTA CCCATCTCCT CCTCTTCCTT CTTCATCTTC CTCTTCTTCG GCTAACCATC TCAACGAAGA TGATGATGAT TCTCTCTCTG TGTTGAAGCT TCTTCCAGCA ACGATTTTGG TTCTCGTTTC TGTTCTCTCA GCTGAAGAAA GAGAAGTTCT TGCTTACTTA ATCACAAGAG GAACCACCAT TTCCGATAGA GGGAACTCTT CTTCGAAGAA TAACAAGACG AAGAAGAAGA GCAACAACAA ATCTGCCAAA AATCACAAGC CACCAGTTTT CGATTGTGAG TGTTTCGATT GTTACACTAA CTACTGGTTT CGTTGGGATT CATCGCCGAA TCGCGAGCTT ATCCATGAAA TCATCGAAGC TTTCGAGAAT CATCATCTCA CTAGTGGTGA ACAAAACTCC GCTTCTCGCA ACAAATCTAA GAGAGGTAAG AAGAAAGAGA AACCGGGTCG TCGGGTCACT GATTCGGATA GTAATAATAA ACCGGGTCTT CGGGTTAGTG ATGATGATGA TAAGGTTTCT AAACCCGTCG TCGAGCCAAT GACTGAGACC ACTGTTTCCG AGAGTAGCCA CGTGTCGTCA CCAGATAGAT TGAGTGAAGC TGAGGTGGCG GAAGGAGAGC CGGAGGATGA GATTGTTGTT GAAGAAGACG AGGAAGAGGA AGAAGAATCG ACGGTGGTTG TTTTTGCGGC GGCGGCGAGT ACTGTGACGG GACACAAGGG ATTGGCGAGG AAGGTATTGC CGGACGTGTT GGGTTTGTTC AATTCCAATT TTTGGAGGCT TTGGAATCCG AACGCATAAA AGCATCGACC GGAAAAAGTT ATGCTTTTTT TTTTTTGTTG TTACTGTTTT CTCAGGAAAA AAATATAATC TCATCTTTTG CTTTAAAATT ACATGACTTC TTTGGGGTTA TGTTTAATGG TTGAAAAAAA TGCAGCTCTT TTAG 
Length974
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5052777.. 5053789
Download Sequence
A.thaliana
AGI-codeAT5G13090.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.6635 Ahg313119 RNA-binding (RRM/RBD/RNP motifs) family protein
18.4662 Ahg490251 RNA-binding protein-defense related 1
22.9783 Ahg941831 Protein of unknown function, DUF617
23.7908 Ahg921879 VQ motif-containing protein
34.3511 Ahg951385 homeobox protein 25
50.8331 Ahg485217 nuclear factor Y, subunit C1
52.2972 Ahg475658 beta-hexosaminidase 3
57.8619 Ahg480100 anaphase-promoting complex/cyclosome 2
63.2139 Ahg491684 Translation initiation factor 3 protein
64.6993 Ahg496670 beta-D-xylosidase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression