Detail



ID : Ahg488377

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488377|fgenesh2_kg.6__1511__AT5G15290.1
Sequence
TCATCAAACT CTCACAACCT AACTTCCTTC TCAAGAAACC CCGAAAACCT TAAAGAGCAA AGAGAGAAAA TGAAGTCCGG TCAGGCTGAA ATCGTGGAAA CGAGCAAAGG TATCCAGAAG AGCGGTCTGA TGAGCAGAAG GATTGCGATT CTTGAGTTCA TTCTCAGGAT TGTTGCATTC TTCAACACTA TAGGTAGTGC AATCCTCATG GGAACCACAC ATGAAACTCT GCCTTTCTTT ACTCAATTTA TACGGTTCCA AGCCGAATAC AACGATCTTC CAGCCTTAAC GTATGTCATT TTTGTGGTTG CAAATGCTGT TGTGAGTGGC TACCTTATAA TGTCTCTAAC TTTGGCCTTT GTACACATCG TCAAGAGAAA GACTCAGAAC ACTAGAATTC TTCTTATCGT CCTTGATGTG GCAATGTTGG GTCTTCTAAG TGCTGGAGCG TCCTCAGCAG CAGCCATTGT CTACTTGGCA CACAATGGGA ACAATAAAAC AAACTGGTTT GCTATTTGTC AACAGTTCAA CTCCTTCTGT GAGCGTATCT CCGGTTCTTT GATTGGATCT TTCATTGCCG TTGTCCTCCT CATTCTTCTC ATTCTCCTAT CAGCCATTGC TCTTTCCCGA CGCCACTGAA GATCTGGTCT TAGCCTGAAA TATGAGTTTT CTTTTCCACT GCTTTAAGAA ATACATGATT TGGTGTGTAA AAATGTTAAC TTGAGCTTTT CTCTGCATTT GTGGTTTTTC TTTTCTCATC TCCATTGATA TTTTGTGTGT GAT 
Length783
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5985636.. 5986589
Download Sequence
A.thaliana
AGI-codeAT5G15290.1
DescriptionUncharacterised protein family (UPF0497)
TAIR curator summary
Alias[CASP5][Casparian strip membrane domain protein 5]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg931077
8.83176 Ahg896238 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
16.5529 Ahg926360 F-box and associated interaction domains-containing protein
19.2094 Virus1574
22.8473 Ahg950400
25.2982 Virus3916
30.1662 Ahg911050 DNA polymerase lambda (POLL)
35.2846 Ahg934133
39.2046 Virus1511
41.6413 Virus1072
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression