Detail



ID : Ahg488508

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488508|fgenesh2_kg.6__1642__AT5G16520.1
Sequence
TGTGATGGCG TGCCCTAGAA ACTCCATAAC ATACAACGCC ACGCGCTGCG CGTGCGGTAT CGGTCAGCTG CTAAACCGGA GTTCCGGGAG CTGCGAGATC TTCGGTTGGC CGTCGACGAT CTCAACGGAC AAAGATGTTA ACTACAGCGT AATATCATTC GCCGATAATT TATTCGCTTT CGATAGGATC CGTAAGTTCA CGCAATCTCA AGCTGTTTTC TTAGAAGCCA CGCTCGTGAT GCTTCTCTCC TGGTTAGTCT TTTGCTTCTT CCTGAGATTC ACCAAACTCG GCGATGGTCG TAATGTCTGG TTCAATCTCC GTTGGTGGAT TACTCGCCTT GACGTCTTCT TCTCCACTAG ACATTGGCTT GATGATCAAC AAATTGTCAA GAAACGTAAA ACAGAACTTG GTGGAACATT ATCTGTTGCG AGCTGGATTG TTTTCATTGG ATTATTCGCT GCGCTGCTTT ATCAAATCAT AACCAAGAGA ACAATTGAAG TTCACAATGT GAGAGCTACT GGTTCTCCGG ATTTGATCTC ATTCGAGAAC GATTTGGAGT TTAACATTAC TGCTGTTTCT GATATGAGTT GCTCTAATTT ACGCGGTATT GGGAATGTGG TCACTGGTAA TCCCGGATTC AGCGAGTTCA AAGTTGCTGC TCTTTCCCGT TTAGGAAGCT ATGCTTGTAA GAACACAACT TCAGGGCCAA CTGTGAATTT CAAGTGTACC AAATGTCGTC TCACCAGTGA TTATATCTAT ATCTCGTGGC ATTTCGTTGA TCTTCCTGAT TCGCCTGCCG CTGCTGTTGG ATTTCAGTTT AACTTTACGT CTAAGAATGG AGATAACAAG AAGCATATGA GTTTTGTTAG TGGTACTCTG AGAAACGGGA GCATCCTTGA TGAAAGTCCA GTTACTTTCC GTGGAACCGA AGGGAACGTA TTGAAGTTTA ATCTGTTTCC TCGGATTTAC CATCATTTGC ATGATCTTAA GCTAATCCAA CCTCTGTTTC ACGAGTTTAT CCCTGGCTCT GTTTACCGAG ACACTACTCA ACTTCAGGCA TCTATGGGAA GGTCAACAGA TGGCATACTC AACACCACGT TGTTCATCAA CTATCTGTCT GCTTATATTG TTGAGATCGA CCATGAAAAT ATACTCGGTC CTGTTAGCTT CCTAGCCGAT CTTGGTGGTT TGTATTGCAT CAGTATTGGC TTATTTTTCT ACCTACTAGT GCAGTGTGAG TATAGGATCA AGAAGCTGCG AAACGAAGAT ACCGTTTTCA GGAAGATAAG GAATCGTCGT AAAGCTCTAG ATCACTGGGA TAAACTGAGA AGATATGTTG CATACACATG GGATTGCAGC ATATTGGTCG ATGATGCCAT CAAAACGACA AATTTATCAG GAATTTGTGG TTTAACGAGA CCCTCAACAT CTTCTAATAG CTCGGAACGT GGGCAATCGA TCATGTCGAA CAAGAAACCT AACTTAAGTA TTGAGAAGAA TGTAATTCCA CAACCTGCAA GTCTAGAAAT GAGCTCTTTT GATTCGGCTT CTTCTCTGGC GCATGGAGAT AATTTCTCAA ATAAGAAGAG TATGACTCAT CAAGTTTCTC ATAGTGAAGA CGATTCAATC CCTCCACCTC CTCCAATGGA GTTCACTGAA GGGTCTTCTG GTTCAGAAGT GGACGCAATG GACATCAAGA AGAAATTTCA ACTTCTTTAC GACTACAATG TATTGCTTAG GGAAAAACTT TTAGACACAC AGTCTTTGCT TAATGCTTTG GCACCCAAAG CATCATCATC ATCTTCAACC GCGGAACACG GTGCCTAGAA CATGAGGTTG TCTGACATGT ATTGTTTGTA TACTCCCTGT AACTTCCACA TTTATTGAAC AAAAGGAATG ACTAATGTTT GTTGTATCTT TGTGAATATA CCAAGTTGCT AGTAGTAACA CATTTTTGCT 
Length1960
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6433094.. 6436051
Download Sequence
A.thaliana
AGI-codeAT5G16520.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.6068 Ahg918493 Protein kinase superfamily protein
18.8944 Ahg913127
27.1109 Ahg929227 Nucleotide/sugar transporter family protein
30.348 Ahg479443 fucosyltransferase 11
35.2136 Ahg941442 RING/U-box superfamily protein
38.4187 Ahg932008
42.0476 Ahg332107 evolutionarily conserved C-terminal region 10
49.2341 Ahg496425 glutathione S-transferase tau 9
56.4978 Ahg901838 Transmembrane amino acid transporter family protein
60.0833 Ahg482806 chaperone protein dnaJ-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression